Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 AC100791.3-201ENST00000617619 330 ntBASIC24.35■■□□□ 1.49
SH2D4AQ9H788 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH2D4AQ9H788 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.34■■□□□ 1.49
SH2D4AQ9H788 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 AC091874.3-201ENST00000512672 1195 ntBASIC24.34■■□□□ 1.49
SH2D4AQ9H788 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 MYC-209ENST00000641252 345 ntBASIC24.34■■□□□ 1.49
SH2D4AQ9H788 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.34■■□□□ 1.49
SH2D4AQ9H788 CLDN5-201ENST00000403084 2357 ntBASIC24.34■■□□□ 1.49
SH2D4AQ9H788 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SH2D4AQ9H788 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.48
SH2D4AQ9H788 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
SH2D4AQ9H788 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SH2D4AQ9H788 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 LSM12P1-201ENST00000411836 588 ntBASIC24.32■■□□□ 1.48
SH2D4AQ9H788 DUSP5P2-201ENST00000426873 1033 ntBASIC24.32■■□□□ 1.48
SH2D4AQ9H788 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 AC083880.1-201ENST00000608266 535 ntBASIC24.32■■□□□ 1.48
SH2D4AQ9H788 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH2D4AQ9H788 EP400NL-214ENST00000641289 2402 ntBASIC24.32■■□□□ 1.48
SH2D4AQ9H788 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH2D4AQ9H788 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.3■■□□□ 1.48
SH2D4AQ9H788 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.3■■□□□ 1.48
SH2D4AQ9H788 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 POU5F1P3-201ENST00000428824 1078 ntBASIC24.29■■□□□ 1.48
SH2D4AQ9H788 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms