Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 PLK5-205ENST00000642079 1969 ntBASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 LINC01006-201ENST00000333319 2292 ntBASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 AC121338.2-201ENST00000622535 1744 ntBASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 BX005040.4-201ENST00000637145 1518 ntBASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NUCKS1Q9H1E3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 AC026271.2-201ENST00000428091 497 ntBASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 AC012414.1-201ENST00000556676 535 ntBASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 MIR6084-201ENST00000622012 110 ntBASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 GABARAPL3-202ENST00000624044 1851 ntBASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
NUCKS1Q9H1E3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 RNF165-205ENST00000588679 2904 ntBASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.54■■□□□ 1.2
NUCKS1Q9H1E3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 AL358852.1-201ENST00000623174 1268 ntBASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
NUCKS1Q9H1E3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.52■■□□□ 1.2
NUCKS1Q9H1E3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms