Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AMBRA1Q9C0C7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.47■□□□□ 0.71
AMBRA1Q9C0C7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AMBRA1Q9C0C7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 BX842568.3-201ENST00000418104 571 ntBASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 AF213884.3-201ENST00000563833 479 ntBASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 AC142381.2-201ENST00000566120 298 ntBASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 AL136967.2-201ENST00000623968 743 ntBASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
AMBRA1Q9C0C7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 AC027682.1-201ENST00000562846 899 ntBASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AMBRA1Q9C0C7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 AC006128.1-201ENST00000624704 1661 ntBASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 AC091305.1-201ENST00000479476 895 ntBASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 SMUG1P1-201ENST00000590640 811 ntBASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.44■□□□□ 0.7
AMBRA1Q9C0C7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms