Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FBXO9-203ENST00000370939 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AC117503.4-201ENST00000623229 1418 ntBASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 MAML3-201ENST00000398940 831 ntTSL 5 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 AC011242.1-201ENST00000433596 1158 ntBASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 AL353572.1-201ENST00000442490 417 ntBASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 AC125618.1-201ENST00000472596 563 ntTSL 4 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 AL133380.1-201ENST00000506013 324 ntBASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 ARHGEF38-IT1-201ENST00000512262 456 ntTSL 3 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 CNIH1-207ENST00000557690 838 ntTSL 3 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 HCCAT5-202ENST00000642127 1029 ntBASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 AL355922.2-201ENST00000557335 1398 ntTSL 2 BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-3Q9BYR6 AL445675.1-201ENST00000603868 1410 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 ZNF736P10Y-201ENST00000403990 1110 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 OR52U1P-201ENST00000439752 923 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 MTND1P33-201ENST00000446251 917 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AC093166.2-201ENST00000455969 1017 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AC010468.1-201ENST00000461022 817 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 GK-AS1-201ENST00000464659 651 ntTSL 3 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC02445-201ENST00000551387 459 ntTSL 5 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AC112236.1-201ENST00000561977 1098 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AC007728.2-202ENST00000567728 1150 ntTSL 3 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 BX255925.2-201ENST00000605600 515 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 TUG1_1.1-201ENST00000610654 145 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 Metazoa_SRP.60-201ENST00000616888 305 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AL356266.1-201ENST00000623311 483 ntBASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.79□□□□□ -0.36
KRTAP3-3Q9BYR6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 SNORD116-4-201ENST00000384733 96 ntBASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 AP001596.1-203ENST00000421771 1078 ntTSL 3 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 ATP5G1P3-201ENST00000463301 410 ntBASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 U91319.1-201ENST00000571619 764 ntTSL 3 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 MTATP6P3-201ENST00000581686 676 ntBASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 NARF-IT1-201ENST00000584012 769 ntTSL 5 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 AC068790.6-201ENST00000602558 258 ntBASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 AL162274.1-201ENST00000617191 1098 ntBASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 MTND4P16-201ENST00000466108 1367 ntBASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-3Q9BYR6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 CEBPZOS-201ENST00000392061 695 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 ZNF839P1-201ENST00000403487 861 ntBASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms