Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HDAC8Q9BY41 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 AC007322.3-201ENST00000426526 701 ntBASIC20.8■□□□□ 0.92
HDAC8Q9BY41 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HDAC8Q9BY41 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC8Q9BY41 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 AC133561.1-201ENST00000568600 2415 ntBASIC20.78■□□□□ 0.92
HDAC8Q9BY41 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC8Q9BY41 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 MYC-209ENST00000641252 345 ntBASIC20.77■□□□□ 0.92
HDAC8Q9BY41 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
HDAC8Q9BY41 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
HDAC8Q9BY41 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 AC244015.2-201ENST00000616358 1861 ntBASIC20.76■□□□□ 0.91
HDAC8Q9BY41 MCRIP2P1-201ENST00000394346 511 ntBASIC20.76■□□□□ 0.91
HDAC8Q9BY41 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 CYP2T3P-201ENST00000601990 817 ntBASIC20.76■□□□□ 0.91
HDAC8Q9BY41 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 AC116050.2-201ENST00000612102 1779 ntBASIC20.76■□□□□ 0.91
HDAC8Q9BY41 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC8Q9BY41 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC8Q9BY41 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC8Q9BY41 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
HDAC8Q9BY41 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC8Q9BY41 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC8Q9BY41 LSM12P1-201ENST00000411836 588 ntBASIC20.75■□□□□ 0.91
HDAC8Q9BY41 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
HDAC8Q9BY41 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HDAC8Q9BY41 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.75■□□□□ 0.91
HDAC8Q9BY41 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms