Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.39■■□□□ 1.65
RPAP1Q9BWH6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.39■■□□□ 1.65
RPAP1Q9BWH6 AC133041.1-202ENST00000642053 222 ntBASIC25.39■■□□□ 1.65
RPAP1Q9BWH6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RPAP1Q9BWH6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RPAP1Q9BWH6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 AC003102.1-202ENST00000563394 1796 ntBASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPAP1Q9BWH6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPAP1Q9BWH6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPAP1Q9BWH6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.36■■□□□ 1.65
RPAP1Q9BWH6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.36■■□□□ 1.65
RPAP1Q9BWH6 MIR4651-201ENST00000582622 73 ntBASIC25.36■■□□□ 1.65
RPAP1Q9BWH6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC25.36■■□□□ 1.65
RPAP1Q9BWH6 Z98882.1-201ENST00000622160 2253 ntBASIC25.36■■□□□ 1.65
RPAP1Q9BWH6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RPAP1Q9BWH6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 TERF1P5-201ENST00000477545 1207 ntBASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 AC068338.2-201ENST00000563278 1430 ntBASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RPAP1Q9BWH6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPAP1Q9BWH6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.33■■□□□ 1.65
RPAP1Q9BWH6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
RPAP1Q9BWH6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RPAP1Q9BWH6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RPAP1Q9BWH6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPAP1Q9BWH6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RPAP1Q9BWH6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.32■■□□□ 1.64
RPAP1Q9BWH6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.32■■□□□ 1.64
RPAP1Q9BWH6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
RPAP1Q9BWH6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPAP1Q9BWH6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.32■■□□□ 1.64
RPAP1Q9BWH6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPAP1Q9BWH6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms