Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
EBF4Q9BQW3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.31■□□□□ 0.84
EBF4Q9BQW3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.31■□□□□ 0.84
EBF4Q9BQW3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF4Q9BQW3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EBF4Q9BQW3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF4Q9BQW3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF4Q9BQW3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF4Q9BQW3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 KRT16P3-201ENST00000439127 1283 ntBASIC20.3■□□□□ 0.84
EBF4Q9BQW3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EBF4Q9BQW3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
EBF4Q9BQW3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
EBF4Q9BQW3 AC087289.5-201ENST00000586076 3175 ntBASIC20.28■□□□□ 0.84
EBF4Q9BQW3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 AC099778.1-201ENST00000568593 1911 ntBASIC20.27■□□□□ 0.84
EBF4Q9BQW3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 FP700111.2-201ENST00000619190 1892 ntBASIC20.27■□□□□ 0.84
EBF4Q9BQW3 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.27■□□□□ 0.84
EBF4Q9BQW3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EBF4Q9BQW3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
EBF4Q9BQW3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.26■□□□□ 0.83
EBF4Q9BQW3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.26■□□□□ 0.83
EBF4Q9BQW3 AP005435.1-201ENST00000529293 1178 ntBASIC20.26■□□□□ 0.83
EBF4Q9BQW3 AL356740.2-201ENST00000601559 647 ntBASIC20.26■□□□□ 0.83
EBF4Q9BQW3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
EBF4Q9BQW3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
EBF4Q9BQW3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms