Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMR3AQ99954 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMR3AQ99954 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SMR3AQ99954 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMR3AQ99954 KRASP1-201ENST00000407852 552 ntBASIC17.14■□□□□ 0.33
SMR3AQ99954 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMR3AQ99954 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.14■□□□□ 0.33
SMR3AQ99954 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.14■□□□□ 0.33
SMR3AQ99954 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.14■□□□□ 0.33
SMR3AQ99954 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMR3AQ99954 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.14■□□□□ 0.33
SMR3AQ99954 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMR3AQ99954 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.14■□□□□ 0.33
SMR3AQ99954 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.14■□□□□ 0.33
SMR3AQ99954 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMR3AQ99954 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMR3AQ99954 AL135905.2-201ENST00000584934 1404 ntBASIC17.13■□□□□ 0.33
SMR3AQ99954 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMR3AQ99954 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SMR3AQ99954 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMR3AQ99954 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SMR3AQ99954 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.13■□□□□ 0.33
SMR3AQ99954 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMR3AQ99954 AC133681.1-201ENST00000465482 601 ntBASIC17.13■□□□□ 0.33
SMR3AQ99954 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.13■□□□□ 0.33
SMR3AQ99954 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.13■□□□□ 0.33
SMR3AQ99954 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.13■□□□□ 0.33
SMR3AQ99954 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.13■□□□□ 0.33
SMR3AQ99954 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.13■□□□□ 0.33
SMR3AQ99954 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.13■□□□□ 0.33
SMR3AQ99954 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SMR3AQ99954 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.13■□□□□ 0.33
SMR3AQ99954 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMR3AQ99954 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMR3AQ99954 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMR3AQ99954 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
SMR3AQ99954 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SMR3AQ99954 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SMR3AQ99954 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
SMR3AQ99954 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.12■□□□□ 0.33
SMR3AQ99954 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.12■□□□□ 0.33
SMR3AQ99954 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.12■□□□□ 0.33
SMR3AQ99954 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.12■□□□□ 0.33
SMR3AQ99954 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SMR3AQ99954 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.12■□□□□ 0.33
SMR3AQ99954 AC110285.5-201ENST00000611501 352 ntBASIC17.12■□□□□ 0.33
SMR3AQ99954 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SMR3AQ99954 AC092865.7-201ENST00000641832 219 ntBASIC17.12■□□□□ 0.33
SMR3AQ99954 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SMR3AQ99954 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SMR3AQ99954 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMR3AQ99954 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMR3AQ99954 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMR3AQ99954 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMR3AQ99954 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
SMR3AQ99954 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMR3AQ99954 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMR3AQ99954 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.11■□□□□ 0.33
SMR3AQ99954 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.11■□□□□ 0.33
SMR3AQ99954 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.11■□□□□ 0.33
SMR3AQ99954 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.11■□□□□ 0.33
SMR3AQ99954 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMR3AQ99954 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMR3AQ99954 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMR3AQ99954 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMR3AQ99954 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.11■□□□□ 0.33
SMR3AQ99954 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.11■□□□□ 0.33
SMR3AQ99954 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
SMR3AQ99954 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.11■□□□□ 0.33
SMR3AQ99954 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.11■□□□□ 0.33
SMR3AQ99954 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMR3AQ99954 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.1■□□□□ 0.33
SMR3AQ99954 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 MMP23A-201ENST00000234610 1017 ntBASIC17.1■□□□□ 0.33
SMR3AQ99954 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.1■□□□□ 0.33
SMR3AQ99954 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.1■□□□□ 0.33
SMR3AQ99954 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SMR3AQ99954 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.1■□□□□ 0.33
SMR3AQ99954 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.1■□□□□ 0.33
SMR3AQ99954 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.1■□□□□ 0.33
SMR3AQ99954 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.1■□□□□ 0.33
SMR3AQ99954 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMR3AQ99954 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms