Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.98■■□□□ 1.11
SMOQ99835 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SMOQ99835 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.98■■□□□ 1.11
SMOQ99835 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SMOQ99835 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SMOQ99835 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SMOQ99835 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMOQ99835 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMOQ99835 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMOQ99835 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
SMOQ99835 CYP2T1P-201ENST00000432607 1285 ntBASIC21.97■■□□□ 1.11
SMOQ99835 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.97■■□□□ 1.11
SMOQ99835 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.97■■□□□ 1.11
SMOQ99835 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.97■■□□□ 1.11
SMOQ99835 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMOQ99835 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMOQ99835 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMOQ99835 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.97■■□□□ 1.11
SMOQ99835 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMOQ99835 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMOQ99835 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMOQ99835 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.96■■□□□ 1.11
SMOQ99835 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMOQ99835 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SMOQ99835 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SMOQ99835 HLA-L-209ENST00000420110 1011 ntBASIC21.96■■□□□ 1.11
SMOQ99835 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMOQ99835 AL591742.1-201ENST00000604433 565 ntBASIC21.96■■□□□ 1.11
SMOQ99835 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMOQ99835 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.96■■□□□ 1.11
SMOQ99835 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.96■■□□□ 1.11
SMOQ99835 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SMOQ99835 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SMOQ99835 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMOQ99835 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SMOQ99835 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMOQ99835 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMOQ99835 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.95■■□□□ 1.1
SMOQ99835 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMOQ99835 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SMOQ99835 AC016405.3-201ENST00000607710 860 ntBASIC21.95■■□□□ 1.1
SMOQ99835 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.95■■□□□ 1.1
SMOQ99835 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SMOQ99835 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMOQ99835 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.94■■□□□ 1.1
SMOQ99835 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.94■■□□□ 1.1
SMOQ99835 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.94■■□□□ 1.1
SMOQ99835 AC083906.2-201ENST00000511578 360 ntBASIC21.94■■□□□ 1.1
SMOQ99835 AL121832.2-201ENST00000610979 668 ntBASIC21.94■■□□□ 1.1
SMOQ99835 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMOQ99835 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMOQ99835 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMOQ99835 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMOQ99835 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.94■■□□□ 1.1
SMOQ99835 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMOQ99835 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.93■■□□□ 1.1
SMOQ99835 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMOQ99835 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMOQ99835 GPX1P1-201ENST00000388829 606 ntBASIC21.93■■□□□ 1.1
SMOQ99835 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMOQ99835 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SMOQ99835 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SMOQ99835 AC133552.2-202ENST00000575694 574 ntBASIC21.93■■□□□ 1.1
SMOQ99835 AC104771.1-201ENST00000603335 964 ntBASIC21.93■■□□□ 1.1
SMOQ99835 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SMOQ99835 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.93■■□□□ 1.1
SMOQ99835 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMOQ99835 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SMOQ99835 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SMOQ99835 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SMOQ99835 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.92■■□□□ 1.1
SMOQ99835 GUSBP6-202ENST00000438529 1198 ntBASIC21.92■■□□□ 1.1
SMOQ99835 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.92■■□□□ 1.1
SMOQ99835 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.92■■□□□ 1.1
SMOQ99835 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.92■■□□□ 1.1
SMOQ99835 AL162412.1-201ENST00000567129 965 ntBASIC21.92■■□□□ 1.1
SMOQ99835 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMOQ99835 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
SMOQ99835 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SMOQ99835 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.92■■□□□ 1.1
SMOQ99835 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.92■■□□□ 1.1
SMOQ99835 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMOQ99835 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SMOQ99835 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.91■■□□□ 1.1
SMOQ99835 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMOQ99835 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.91■■□□□ 1.1
SMOQ99835 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMOQ99835 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMOQ99835 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SMOQ99835 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.91■■□□□ 1.1
SMOQ99835 AL109923.1-201ENST00000618799 583 ntBASIC21.91■■□□□ 1.1
SMOQ99835 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.91■■□□□ 1.1
SMOQ99835 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMOQ99835 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SMOQ99835 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMOQ99835 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMOQ99835 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMOQ99835 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SMOQ99835 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMOQ99835 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms