Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.33■□□□□ 0.85
NPAS2Q99743 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS2Q99743 AC012414.1-201ENST00000556676 535 ntBASIC20.33■□□□□ 0.85
NPAS2Q99743 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.33■□□□□ 0.85
NPAS2Q99743 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPAS2Q99743 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.33■□□□□ 0.84
NPAS2Q99743 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.32■□□□□ 0.84
NPAS2Q99743 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS2Q99743 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS2Q99743 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS2Q99743 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS2Q99743 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS2Q99743 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.32■□□□□ 0.84
NPAS2Q99743 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
NPAS2Q99743 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS2Q99743 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NPAS2Q99743 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NPAS2Q99743 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.32■□□□□ 0.84
NPAS2Q99743 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.32■□□□□ 0.84
NPAS2Q99743 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS2Q99743 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.32■□□□□ 0.84
NPAS2Q99743 AL162430.1-201ENST00000480705 870 ntBASIC20.32■□□□□ 0.84
NPAS2Q99743 AL358852.1-201ENST00000623174 1268 ntBASIC20.32■□□□□ 0.84
NPAS2Q99743 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.32■□□□□ 0.84
NPAS2Q99743 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS2Q99743 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NPAS2Q99743 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.31■□□□□ 0.84
NPAS2Q99743 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS2Q99743 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 AC027612.3-201ENST00000413684 1047 ntBASIC20.31■□□□□ 0.84
NPAS2Q99743 YBX1P1-201ENST00000445822 960 ntBASIC20.31■□□□□ 0.84
NPAS2Q99743 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS2Q99743 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.31■□□□□ 0.84
NPAS2Q99743 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
NPAS2Q99743 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS2Q99743 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS2Q99743 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS2Q99743 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS2Q99743 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS2Q99743 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.3■□□□□ 0.84
NPAS2Q99743 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS2Q99743 AC092666.2-201ENST00000613287 246 ntBASIC20.3■□□□□ 0.84
NPAS2Q99743 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.3■□□□□ 0.84
NPAS2Q99743 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS2Q99743 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS2Q99743 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS2Q99743 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS2Q99743 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS2Q99743 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS2Q99743 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS2Q99743 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.29■□□□□ 0.84
NPAS2Q99743 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS2Q99743 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.29■□□□□ 0.84
NPAS2Q99743 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.29■□□□□ 0.84
NPAS2Q99743 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.29■□□□□ 0.84
NPAS2Q99743 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.29■□□□□ 0.84
NPAS2Q99743 AL354811.1-201ENST00000610286 706 ntBASIC20.29■□□□□ 0.84
NPAS2Q99743 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.29■□□□□ 0.84
NPAS2Q99743 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS2Q99743 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS2Q99743 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NPAS2Q99743 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.28■□□□□ 0.84
NPAS2Q99743 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.28■□□□□ 0.84
NPAS2Q99743 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NPAS2Q99743 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NPAS2Q99743 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NPAS2Q99743 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.28■□□□□ 0.84
NPAS2Q99743 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.28■□□□□ 0.84
NPAS2Q99743 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.28■□□□□ 0.84
NPAS2Q99743 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.28■□□□□ 0.84
NPAS2Q99743 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.28■□□□□ 0.84
NPAS2Q99743 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS2Q99743 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NPAS2Q99743 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NPAS2Q99743 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS2Q99743 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS2Q99743 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS2Q99743 AL391422.3-201ENST00000603791 2761 ntBASIC20.27■□□□□ 0.84
NPAS2Q99743 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms