Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
AP1S3Q96PC3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.71■□□□□ 0.1
AP1S3Q96PC3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
AP1S3Q96PC3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP1S3Q96PC3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP1S3Q96PC3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP1S3Q96PC3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
AP1S3Q96PC3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.7■□□□□ 0.1
AP1S3Q96PC3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 AC005229.4-201ENST00000610085 2198 ntBASIC15.69■□□□□ 0.1
AP1S3Q96PC3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 AC103724.3-201ENST00000564481 992 ntBASIC15.69■□□□□ 0.1
AP1S3Q96PC3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S3Q96PC3 KRT8P33-201ENST00000508125 1423 ntBASIC15.68■□□□□ 0.1
AP1S3Q96PC3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 BX664725.1-201ENST00000438252 379 ntBASIC15.68■□□□□ 0.1
AP1S3Q96PC3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 AL031848.2-201ENST00000607670 837 ntBASIC15.68■□□□□ 0.1
AP1S3Q96PC3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S3Q96PC3 Z98882.1-201ENST00000622160 2253 ntBASIC15.68■□□□□ 0.1
AP1S3Q96PC3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms