Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.56■□□□□ 0.4
NEIL1Q96FI4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEIL1Q96FI4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEIL1Q96FI4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NEIL1Q96FI4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEIL1Q96FI4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEIL1Q96FI4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 AC026471.6-201ENST00000622954 1905 ntBASIC17.55■□□□□ 0.4
NEIL1Q96FI4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEIL1Q96FI4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 SLC7A5P1-201ENST00000568957 537 ntBASIC17.54■□□□□ 0.4
NEIL1Q96FI4 MFSD11-216ENST00000590393 1141 ntBASIC17.54■□□□□ 0.4
NEIL1Q96FI4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 AC073111.5-205ENST00000641717 521 ntBASIC17.54■□□□□ 0.4
NEIL1Q96FI4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 AC010542.4-201ENST00000563151 1910 ntBASIC17.54■□□□□ 0.4
NEIL1Q96FI4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NEIL1Q96FI4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NEIL1Q96FI4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 SLC7A5P2-201ENST00000553010 536 ntBASIC17.52■□□□□ 0.4
NEIL1Q96FI4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEIL1Q96FI4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NEIL1Q96FI4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.52■□□□□ 0.39
NEIL1Q96FI4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms