Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.11
TRIM11Q96F44 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM11Q96F44 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM11Q96F44 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM11Q96F44 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.01■■□□□ 1.11
TRIM11Q96F44 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM11Q96F44 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM11Q96F44 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
TRIM11Q96F44 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM11Q96F44 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM11Q96F44 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM11Q96F44 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM11Q96F44 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM11Q96F44 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
TRIM11Q96F44 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22■■□□□ 1.11
TRIM11Q96F44 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22■■□□□ 1.11
TRIM11Q96F44 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22■■□□□ 1.11
TRIM11Q96F44 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
TRIM11Q96F44 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM11Q96F44 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM11Q96F44 AC123595.1-201ENST00000440769 1046 ntBASIC22■■□□□ 1.11
TRIM11Q96F44 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22■■□□□ 1.11
TRIM11Q96F44 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22■■□□□ 1.11
TRIM11Q96F44 AC120498.10-201ENST00000621827 505 ntBASIC22■■□□□ 1.11
TRIM11Q96F44 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM11Q96F44 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22■■□□□ 1.11
TRIM11Q96F44 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM11Q96F44 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM11Q96F44 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22■■□□□ 1.11
TRIM11Q96F44 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM11Q96F44 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM11Q96F44 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM11Q96F44 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM11Q96F44 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM11Q96F44 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM11Q96F44 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM11Q96F44 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM11Q96F44 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
TRIM11Q96F44 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
TRIM11Q96F44 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM11Q96F44 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM11Q96F44 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.99■■□□□ 1.11
TRIM11Q96F44 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.99■■□□□ 1.11
TRIM11Q96F44 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM11Q96F44 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TRIM11Q96F44 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM11Q96F44 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM11Q96F44 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM11Q96F44 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM11Q96F44 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM11Q96F44 KRT16P2-201ENST00000414673 1423 ntBASIC21.98■■□□□ 1.11
TRIM11Q96F44 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM11Q96F44 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.98■■□□□ 1.11
TRIM11Q96F44 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TRIM11Q96F44 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.98■■□□□ 1.11
TRIM11Q96F44 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.98■■□□□ 1.11
TRIM11Q96F44 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.98■■□□□ 1.11
TRIM11Q96F44 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM11Q96F44 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM11Q96F44 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM11Q96F44 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM11Q96F44 LINC01521-201ENST00000504184 1943 ntBASIC21.98■■□□□ 1.11
TRIM11Q96F44 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM11Q96F44 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.98■■□□□ 1.11
TRIM11Q96F44 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
TRIM11Q96F44 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
TRIM11Q96F44 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
TRIM11Q96F44 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 AC010141.2-201ENST00000452426 721 ntBASIC21.97■■□□□ 1.11
TRIM11Q96F44 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM11Q96F44 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.97■■□□□ 1.11
TRIM11Q96F44 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TRIM11Q96F44 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TRIM11Q96F44 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM11Q96F44 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TRIM11Q96F44 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM11Q96F44 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM11Q96F44 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM11Q96F44 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM11Q96F44 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM11Q96F44 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM11Q96F44 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM11Q96F44 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM11Q96F44 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TRIM11Q96F44 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM11Q96F44 YBX1P1-201ENST00000445822 960 ntBASIC21.96■■□□□ 1.11
TRIM11Q96F44 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM11Q96F44 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 848.8 ms