Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.56■□□□□ 0.88
USP7Q93009 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.56■□□□□ 0.88
USP7Q93009 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP7Q93009 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP7Q93009 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP7Q93009 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP7Q93009 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP7Q93009 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP7Q93009 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP7Q93009 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.55■□□□□ 0.88
USP7Q93009 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP7Q93009 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP7Q93009 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.55■□□□□ 0.88
USP7Q93009 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP7Q93009 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP7Q93009 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP7Q93009 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.55■□□□□ 0.88
USP7Q93009 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.55■□□□□ 0.88
USP7Q93009 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.55■□□□□ 0.88
USP7Q93009 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP7Q93009 FEM1AP4-201ENST00000443167 1987 ntBASIC20.55■□□□□ 0.88
USP7Q93009 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP7Q93009 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.55■□□□□ 0.88
USP7Q93009 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
USP7Q93009 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.54■□□□□ 0.88
USP7Q93009 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP7Q93009 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.54■□□□□ 0.88
USP7Q93009 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
USP7Q93009 AL121832.2-201ENST00000610979 668 ntBASIC20.54■□□□□ 0.88
USP7Q93009 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP7Q93009 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.54■□□□□ 0.88
USP7Q93009 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP7Q93009 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.54■□□□□ 0.88
USP7Q93009 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.54■□□□□ 0.88
USP7Q93009 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP7Q93009 AC003102.1-202ENST00000563394 1796 ntBASIC20.54■□□□□ 0.88
USP7Q93009 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.54■□□□□ 0.88
USP7Q93009 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.53■□□□□ 0.88
USP7Q93009 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
USP7Q93009 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP7Q93009 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
USP7Q93009 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP7Q93009 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP7Q93009 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP7Q93009 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP7Q93009 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.53■□□□□ 0.88
USP7Q93009 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.53■□□□□ 0.88
USP7Q93009 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP7Q93009 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP7Q93009 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.53■□□□□ 0.88
USP7Q93009 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.53■□□□□ 0.88
USP7Q93009 AC083906.2-201ENST00000511578 360 ntBASIC20.53■□□□□ 0.88
USP7Q93009 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.53■□□□□ 0.88
USP7Q93009 UBE2DNL-204ENST00000602536 740 ntBASIC20.53■□□□□ 0.88
USP7Q93009 AC231657.2-201ENST00000624556 255 ntBASIC20.53■□□□□ 0.88
USP7Q93009 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP7Q93009 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP7Q93009 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP7Q93009 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP7Q93009 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP7Q93009 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.52■□□□□ 0.88
USP7Q93009 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP7Q93009 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP7Q93009 AC007322.1-201ENST00000426983 750 ntBASIC20.52■□□□□ 0.88
USP7Q93009 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.52■□□□□ 0.88
USP7Q93009 DUX4L16-201ENST00000555130 1264 ntBASIC20.52■□□□□ 0.88
USP7Q93009 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.52■□□□□ 0.88
USP7Q93009 AL050303.2-201ENST00000619798 666 ntBASIC20.52■□□□□ 0.88
USP7Q93009 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.52■□□□□ 0.88
USP7Q93009 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.52■□□□□ 0.87
USP7Q93009 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP7Q93009 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.51■□□□□ 0.87
USP7Q93009 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
USP7Q93009 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.51■□□□□ 0.87
USP7Q93009 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.51■□□□□ 0.87
USP7Q93009 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
USP7Q93009 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.51■□□□□ 0.87
USP7Q93009 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.51■□□□□ 0.87
USP7Q93009 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.51■□□□□ 0.87
USP7Q93009 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
USP7Q93009 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
USP7Q93009 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
USP7Q93009 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP7Q93009 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP7Q93009 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP7Q93009 AP006587.3-201ENST00000525742 1516 ntBASIC20.5■□□□□ 0.87
USP7Q93009 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms