Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AP005212.1-201ENST00000581547 1997 ntBASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 RARRES2P6-201ENST00000567333 442 ntBASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40AQ8WXH6 TSPY26P-201ENST00000476365 1326 ntBASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 AC010525.1-201ENST00000585559 441 ntBASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40AQ8WXH6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 IGHV3-19-201ENST00000521488 291 ntBASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB40AQ8WXH6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 AC006128.1-201ENST00000624704 1661 ntBASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 AP005435.1-201ENST00000529293 1178 ntBASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RAB40AQ8WXH6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms