Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 AL117332.1-201ENST00000622628 974 ntBASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 BX323043.1-201ENST00000641006 1765 ntBASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 AC018445.3-201ENST00000624177 1945 ntBASIC20.7■□□□□ 0.91
CKAP2Q8WWK9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 AP006587.3-201ENST00000525742 1516 ntBASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CKAP2Q8WWK9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.69■□□□□ 0.9
CKAP2Q8WWK9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 FP700111.2-201ENST00000619190 1892 ntBASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CKAP2Q8WWK9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP2Q8WWK9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CKAP2Q8WWK9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms