Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 AC087289.5-201ENST00000586076 3175 ntBASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD2Q8NHY2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 AC010141.3-201ENST00000456659 717 ntBASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 AC241377.3-202ENST00000626088 1088 ntBASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 AC241585.3-202ENST00000628937 1088 ntBASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 AC245100.8-202ENST00000629247 1058 ntBASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 AP004607.7-201ENST00000527152 1677 ntBASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD2Q8NHY2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 AL117332.1-201ENST00000622628 974 ntBASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.55■□□□□ 0.88
RFWD2Q8NHY2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 AL034346.1-201ENST00000568244 1277 ntBASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 AC007225.1-201ENST00000566331 1836 ntBASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFWD2Q8NHY2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 AC121338.2-201ENST00000622535 1744 ntBASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 AC087239.1-201ENST00000622671 572 ntBASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 AL512408.1-201ENST00000569378 2000 ntBASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RFWD2Q8NHY2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 AL356441.2-201ENST00000443009 864 ntBASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFWD2Q8NHY2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms