Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 AC083906.2-201ENST00000511578 360 ntBASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 CNN2P6-201ENST00000439038 900 ntBASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 SLC7A5P2-201ENST00000553010 536 ntBASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLDND2Q8NHS1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 AC092667.1-201ENST00000434301 2586 ntBASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDND2Q8NHS1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 TSPY6P-201ENST00000448518 926 ntBASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 SLC7A5P1-201ENST00000568957 537 ntBASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLDND2Q8NHS1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 AC008175.2-201ENST00000612840 297 ntBASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 AC013268.1-206ENST00000638368 961 ntBASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 AC112229.1-201ENST00000639295 961 ntBASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms