Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.3■■■□□ 2.12
COL22A1Q8NFW1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 KRT18P68-201ENST00000392293 1000 ntBASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
COL22A1Q8NFW1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
COL22A1Q8NFW1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 AC007322.3-201ENST00000426526 701 ntBASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 CYP21A1P-202ENST00000354927 1481 ntBASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL22A1Q8NFW1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
COL22A1Q8NFW1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL22A1Q8NFW1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC28.26■■■□□ 2.11
COL22A1Q8NFW1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
COL22A1Q8NFW1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC28.26■■■□□ 2.11
COL22A1Q8NFW1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL22A1Q8NFW1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
COL22A1Q8NFW1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL22A1Q8NFW1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.26■■■□□ 2.11
COL22A1Q8NFW1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL22A1Q8NFW1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 AL023875.1-201ENST00000640777 796 ntBASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
COL22A1Q8NFW1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
COL22A1Q8NFW1 KRASP1-201ENST00000407852 552 ntBASIC28.24■■■□□ 2.11
COL22A1Q8NFW1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC28.24■■■□□ 2.11
COL22A1Q8NFW1 AC110285.5-201ENST00000611501 352 ntBASIC28.24■■■□□ 2.11
COL22A1Q8NFW1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
COL22A1Q8NFW1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL22A1Q8NFW1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
COL22A1Q8NFW1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL22A1Q8NFW1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL22A1Q8NFW1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL22A1Q8NFW1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL22A1Q8NFW1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 PRKY-204ENST00000533551 1019 ntBASIC28.21■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms