Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DNAAF1Q8NEP3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
DNAAF1Q8NEP3 AC138932.1-201ENST00000534164 6830 ntBASIC18.27■□□□□ 0.51
DNAAF1Q8NEP3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
DNAAF1Q8NEP3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
DNAAF1Q8NEP3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DNAAF1Q8NEP3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DNAAF1Q8NEP3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 PLK5-205ENST00000642079 1969 ntBASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.25■□□□□ 0.51
DNAAF1Q8NEP3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 AC006128.1-201ENST00000624704 1661 ntBASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 AP005212.1-201ENST00000581547 1997 ntBASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.24■□□□□ 0.51
DNAAF1Q8NEP3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 UNC93B3-201ENST00000308076 687 ntBASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 AC133561.4-201ENST00000566112 224 ntBASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 MIR4767-201ENST00000582827 78 ntBASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 AC233992.3-201ENST00000607491 485 ntBASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms