Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC33Q8N5R6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC33Q8N5R6 AL121832.2-201ENST00000610979 668 ntBASIC21.84■■□□□ 1.09
CCDC33Q8N5R6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC33Q8N5R6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC33Q8N5R6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC33Q8N5R6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC33Q8N5R6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC33Q8N5R6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC33Q8N5R6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 AC005181.1-201ENST00000604782 1256 ntBASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 AC231657.2-201ENST00000624556 255 ntBASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC33Q8N5R6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC33Q8N5R6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC33Q8N5R6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC33Q8N5R6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC33Q8N5R6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 MYCNOS-205ENST00000641950 531 ntBASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC33Q8N5R6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC33Q8N5R6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC33Q8N5R6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 TSPY6P-201ENST00000448518 926 ntBASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC33Q8N5R6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 CD99P1-205ENST00000527459 561 ntBASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC33Q8N5R6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms