Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TTC9CQ8N5M4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 AC120498.10-201ENST00000621827 505 ntBASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC9CQ8N5M4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 AC010141.2-201ENST00000452426 721 ntBASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 DUX4L2-201ENST00000561772 1275 ntBASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 AC104187.1-201ENST00000607510 612 ntBASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 DUX4L6-201ENST00000626483 1275 ntBASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 DUX4L1-201ENST00000627662 1275 ntBASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 DUX4L8-201ENST00000629013 1275 ntBASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 DUX4L3-201ENST00000630187 1275 ntBASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 DUX4L7-201ENST00000630678 1275 ntBASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 DUX4L5-201ENST00000630834 1275 ntBASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TTC9CQ8N5M4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9CQ8N5M4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms