Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ARHGEF28Q8N1W1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
ARHGEF28Q8N1W1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC29.16■■■□□ 2.26
ARHGEF28Q8N1W1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
ARHGEF28Q8N1W1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
ARHGEF28Q8N1W1 GUSBP5-202ENST00000510805 1989 ntBASIC29.16■■■□□ 2.26
ARHGEF28Q8N1W1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
ARHGEF28Q8N1W1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
ARHGEF28Q8N1W1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 KRT18P29-201ENST00000397031 1267 ntBASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 AC087633.2-202ENST00000565166 1439 ntBASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 CYP21A1P-202ENST00000354927 1481 ntBASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
ARHGEF28Q8N1W1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 AC006058.3-201ENST00000606217 1069 ntBASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
ARHGEF28Q8N1W1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC29.14■■■□□ 2.25
ARHGEF28Q8N1W1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
ARHGEF28Q8N1W1 LSM12P1-201ENST00000411836 588 ntBASIC29.14■■■□□ 2.25
ARHGEF28Q8N1W1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC29.14■■■□□ 2.25
ARHGEF28Q8N1W1 NME6-213ENST00000451657 871 ntTSL 2 BASIC29.14■■■□□ 2.25
ARHGEF28Q8N1W1 AC026366.1-201ENST00000488803 879 ntBASIC29.14■■■□□ 2.25
ARHGEF28Q8N1W1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC29.14■■■□□ 2.25
ARHGEF28Q8N1W1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.25
ARHGEF28Q8N1W1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
ARHGEF28Q8N1W1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
ARHGEF28Q8N1W1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC29.13■■■□□ 2.25
ARHGEF28Q8N1W1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC29.13■■■□□ 2.25
ARHGEF28Q8N1W1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
ARHGEF28Q8N1W1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 ESRRAP1-201ENST00000400596 1257 ntBASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ARHGEF28Q8N1W1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 PNMA6B-201ENST00000538162 1200 ntBASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC29.11■■■□□ 2.25
ARHGEF28Q8N1W1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ARHGEF28Q8N1W1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
ARHGEF28Q8N1W1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ARHGEF28Q8N1W1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
ARHGEF28Q8N1W1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC29.08■■■□□ 2.25
ARHGEF28Q8N1W1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms