Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR6821-201ENST00000617625 74 ntBASIC19.63■□□□□ 0.73
CCDC116Q8IYX3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC116Q8IYX3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC116Q8IYX3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC116Q8IYX3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC116Q8IYX3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC116Q8IYX3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 AC010141.2-201ENST00000452426 721 ntBASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 AC087623.3-201ENST00000607047 1098 ntBASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC116Q8IYX3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 AC034268.1-201ENST00000441047 882 ntBASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC116Q8IYX3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 SLC7A5P2-201ENST00000553010 536 ntBASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC116Q8IYX3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 AC120498.10-201ENST00000621827 505 ntBASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC116Q8IYX3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC116Q8IYX3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC116Q8IYX3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC116Q8IYX3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 KRT18P61-201ENST00000585825 1298 ntBASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 NTF6G-201ENST00000591094 616 ntBASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
CCDC116Q8IYX3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms