Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 HLA-B-256ENST00000639848 1089 ntBASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
TMEFF1Q8IYR6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 AC245052.3-201ENST00000450182 901 ntBASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 FAM197Y4-202ENST00000622692 608 ntBASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEFF1Q8IYR6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
TMEFF1Q8IYR6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 C1QBPP2-201ENST00000528754 825 ntBASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 AC100791.3-201ENST00000617619 330 ntBASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEFF1Q8IYR6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 RPPH1-201ENST00000516869 333 ntBASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 AL589743.5-201ENST00000616611 1050 ntBASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEFF1Q8IYR6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEFF1Q8IYR6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 PNMA6B-201ENST00000538162 1200 ntBASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms