Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SLX4Q8IY92 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
SLX4Q8IY92 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
SLX4Q8IY92 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
SLX4Q8IY92 KRT18P68-201ENST00000392293 1000 ntBASIC25.69■■□□□ 1.7
SLX4Q8IY92 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.69■■□□□ 1.7
SLX4Q8IY92 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
SLX4Q8IY92 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.69■■□□□ 1.7
SLX4Q8IY92 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SLX4Q8IY92 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SLX4Q8IY92 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SLX4Q8IY92 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.69■■□□□ 1.7
SLX4Q8IY92 AC093323.1-202ENST00000635031 2045 ntBASIC25.68■■□□□ 1.7
SLX4Q8IY92 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 KRT18P21-201ENST00000515767 1272 ntBASIC25.68■■□□□ 1.7
SLX4Q8IY92 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.68■■□□□ 1.7
SLX4Q8IY92 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 AC026471.6-201ENST00000622954 1905 ntBASIC25.68■■□□□ 1.7
SLX4Q8IY92 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLX4Q8IY92 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 RPS2P55-201ENST00000397318 883 ntBASIC25.67■■□□□ 1.7
SLX4Q8IY92 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 AC107956.1-201ENST00000494359 873 ntBASIC25.67■■□□□ 1.7
SLX4Q8IY92 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.67■■□□□ 1.7
SLX4Q8IY92 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.67■■□□□ 1.7
SLX4Q8IY92 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.67■■□□□ 1.7
SLX4Q8IY92 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.67■■□□□ 1.7
SLX4Q8IY92 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SLX4Q8IY92 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.67■■□□□ 1.7
SLX4Q8IY92 AL355075.4-201ENST00000554988 638 ntBASIC25.67■■□□□ 1.7
SLX4Q8IY92 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SLX4Q8IY92 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.67■■□□□ 1.7
SLX4Q8IY92 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.67■■□□□ 1.7
SLX4Q8IY92 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SLX4Q8IY92 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SLX4Q8IY92 AC233702.5-201ENST00000584107 538 ntBASIC25.66■■□□□ 1.7
SLX4Q8IY92 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SLX4Q8IY92 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SLX4Q8IY92 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SLX4Q8IY92 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLX4Q8IY92 AC124016.1-201ENST00000609552 612 ntBASIC25.65■■□□□ 1.7
SLX4Q8IY92 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
SLX4Q8IY92 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SLX4Q8IY92 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLX4Q8IY92 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLX4Q8IY92 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLX4Q8IY92 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLX4Q8IY92 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLX4Q8IY92 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLX4Q8IY92 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.65■■□□□ 1.7
SLX4Q8IY92 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
SLX4Q8IY92 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLX4Q8IY92 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLX4Q8IY92 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SLX4Q8IY92 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
SLX4Q8IY92 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLX4Q8IY92 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.64■■□□□ 1.7
SLX4Q8IY92 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
SLX4Q8IY92 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SLX4Q8IY92 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SLX4Q8IY92 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.64■■□□□ 1.7
SLX4Q8IY92 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SLX4Q8IY92 MTDHP1-201ENST00000605323 784 ntBASIC25.64■■□□□ 1.7
SLX4Q8IY92 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SLX4Q8IY92 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.64■■□□□ 1.69
SLX4Q8IY92 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
SLX4Q8IY92 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SLX4Q8IY92 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SLX4Q8IY92 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.63■■□□□ 1.69
SLX4Q8IY92 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.63■■□□□ 1.69
SLX4Q8IY92 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SLX4Q8IY92 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
SLX4Q8IY92 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLX4Q8IY92 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLX4Q8IY92 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SLX4Q8IY92 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms