Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 ID1-201ENST00000376105 1233 ntBASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCUBE3Q8IX30 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 AC004911.1-201ENST00000416316 871 ntBASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 AC011767.1-201ENST00000617410 1153 ntBASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCUBE3Q8IX30 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 AL049796.1-201ENST00000565336 1766 ntBASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 MFSD11-216ENST00000590393 1141 ntBASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SCUBE3Q8IX30 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 BID-214ENST00000617586 542 ntTSL 5 BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCUBE3Q8IX30 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 AC010536.3-201ENST00000620306 533 ntBASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCUBE3Q8IX30 RBM17P2-201ENST00000616397 1405 ntBASIC21.89■■□□□ 1.1
SCUBE3Q8IX30 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.89■■□□□ 1.1
SCUBE3Q8IX30 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCUBE3Q8IX30 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCUBE3Q8IX30 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.88■■□□□ 1.09
SCUBE3Q8IX30 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCUBE3Q8IX30 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.88■■□□□ 1.09
SCUBE3Q8IX30 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCUBE3Q8IX30 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCUBE3Q8IX30 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCUBE3Q8IX30 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCUBE3Q8IX30 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.88■■□□□ 1.09
SCUBE3Q8IX30 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms