Protein–RNA interactions for Protein: Q86VQ0

LCA5, Lebercilin, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5Q86VQ0 LINC01006-201ENST00000333319 2292 ntBASIC20.73■□□□□ 0.91
LCA5Q86VQ0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCA5Q86VQ0 AC055733.4-201ENST00000638462 1354 ntBASIC20.72■□□□□ 0.91
LCA5Q86VQ0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 MIR4767-201ENST00000582827 78 ntBASIC20.71■□□□□ 0.91
LCA5Q86VQ0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCA5Q86VQ0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
LCA5Q86VQ0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 AP005212.1-201ENST00000581547 1997 ntBASIC20.7■□□□□ 0.9
LCA5Q86VQ0 PLK5-205ENST00000642079 1969 ntBASIC20.7■□□□□ 0.9
LCA5Q86VQ0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCA5Q86VQ0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LCA5Q86VQ0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCA5Q86VQ0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 AC121338.2-201ENST00000622535 1744 ntBASIC20.67■□□□□ 0.9
LCA5Q86VQ0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 AC126544.1-201ENST00000580842 1059 ntBASIC20.67■□□□□ 0.9
LCA5Q86VQ0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms