Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 AP003097.1-201ENST00000530657 1135 ntBASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 AC142381.4-202ENST00000563973 229 ntBASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 AL355472.2-201ENST00000422958 438 ntBASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 KRT17P1-201ENST00000399211 1546 ntBASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 AC008403.3-201ENST00000598924 454 ntBASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAI1Q7Z5J4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAI1Q7Z5J4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAI1Q7Z5J4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RAI1Q7Z5J4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAI1Q7Z5J4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.87■□□□□ 0.45
RAI1Q7Z5J4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.87■□□□□ 0.45
RAI1Q7Z5J4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.87■□□□□ 0.45
RAI1Q7Z5J4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RAI1Q7Z5J4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 AC060766.5-201ENST00000590539 871 ntBASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 AC006058.3-201ENST00000606217 1069 ntBASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 AC026366.1-201ENST00000488803 879 ntBASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.86■□□□□ 0.45
RAI1Q7Z5J4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms