Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 KRT18P11-201ENST00000435214 1283 ntBASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 AC104187.1-201ENST00000607510 612 ntBASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP1BQ7LBR1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 AC092053.2-201ENST00000640557 1818 ntBASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 AC073130.3-201ENST00000624389 2278 ntBASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP1BQ7LBR1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 AC092667.1-201ENST00000434301 2586 ntBASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHMP1BQ7LBR1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP1BQ7LBR1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CHMP1BQ7LBR1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP1BQ7LBR1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP1BQ7LBR1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP1BQ7LBR1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP1BQ7LBR1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP1BQ7LBR1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP1BQ7LBR1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP1BQ7LBR1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 AC080038.3-201ENST00000623346 1952 ntBASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP1BQ7LBR1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms