Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 AC245052.3-201ENST00000450182 901 ntBASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 AC243732.1-201ENST00000612648 864 ntBASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COLCA1Q6ZS62 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
COLCA1Q6ZS62 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
COLCA1Q6ZS62 AC121338.2-201ENST00000622535 1744 ntBASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 KRT18P5-201ENST00000436075 1291 ntBASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COLCA1Q6ZS62 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 AC011484.1-201ENST00000377652 1995 ntBASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COLCA1Q6ZS62 AC006128.1-201ENST00000624704 1661 ntBASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COLCA1Q6ZS62 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 RBM17P2-201ENST00000616397 1405 ntBASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms