Protein–RNA interactions for Protein: Q6ZMP0

THSD4, Thrombospondin type-1 domain-containing protein 4, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4Q6ZMP0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THSD4Q6ZMP0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 AL136967.2-201ENST00000623968 743 ntBASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THSD4Q6ZMP0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 AC091305.1-201ENST00000479476 895 ntBASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 RARRES2P6-201ENST00000567333 442 ntBASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
THSD4Q6ZMP0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THSD4Q6ZMP0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 GABARAPL3-202ENST00000624044 1851 ntBASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 AC012183.1-201ENST00000625197 499 ntBASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
THSD4Q6ZMP0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 SUDS3P1-201ENST00000505831 966 ntBASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 AC012414.1-201ENST00000556676 535 ntBASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 EEF1DP3-203ENST00000566025 782 ntBASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.77■□□□□ 0.6
THSD4Q6ZMP0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
THSD4Q6ZMP0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.77■□□□□ 0.59
THSD4Q6ZMP0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
THSD4Q6ZMP0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.76■□□□□ 0.59
THSD4Q6ZMP0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
THSD4Q6ZMP0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms