Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PACS1Q6VY07 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.02■□□□□ 0.96
PACS1Q6VY07 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PACS1Q6VY07 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PACS1Q6VY07 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PACS1Q6VY07 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PACS1Q6VY07 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.02■□□□□ 0.96
PACS1Q6VY07 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PACS1Q6VY07 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.02■□□□□ 0.96
PACS1Q6VY07 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.02■□□□□ 0.96
PACS1Q6VY07 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.02■□□□□ 0.96
PACS1Q6VY07 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PACS1Q6VY07 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.02■□□□□ 0.95
PACS1Q6VY07 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.01■□□□□ 0.95
PACS1Q6VY07 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.01■□□□□ 0.95
PACS1Q6VY07 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
PACS1Q6VY07 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.01■□□□□ 0.95
PACS1Q6VY07 TERF1P2-201ENST00000583350 1212 ntBASIC21.01■□□□□ 0.95
PACS1Q6VY07 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PACS1Q6VY07 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.01■□□□□ 0.95
PACS1Q6VY07 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PACS1Q6VY07 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PACS1Q6VY07 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PACS1Q6VY07 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21■□□□□ 0.95
PACS1Q6VY07 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21■□□□□ 0.95
PACS1Q6VY07 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21■□□□□ 0.95
PACS1Q6VY07 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21■□□□□ 0.95
PACS1Q6VY07 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21■□□□□ 0.95
PACS1Q6VY07 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21■□□□□ 0.95
PACS1Q6VY07 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21■□□□□ 0.95
PACS1Q6VY07 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21■□□□□ 0.95
PACS1Q6VY07 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21■□□□□ 0.95
PACS1Q6VY07 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21■□□□□ 0.95
PACS1Q6VY07 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21■□□□□ 0.95
PACS1Q6VY07 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PACS1Q6VY07 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 PLK5-205ENST00000642079 1969 ntBASIC20.99■□□□□ 0.95
PACS1Q6VY07 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.99■□□□□ 0.95
PACS1Q6VY07 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PACS1Q6VY07 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PACS1Q6VY07 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.99■□□□□ 0.95
PACS1Q6VY07 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PACS1Q6VY07 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.99■□□□□ 0.95
PACS1Q6VY07 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.99■□□□□ 0.95
PACS1Q6VY07 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PACS1Q6VY07 AC006128.1-201ENST00000624704 1661 ntBASIC20.99■□□□□ 0.95
PACS1Q6VY07 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PACS1Q6VY07 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.98■□□□□ 0.95
PACS1Q6VY07 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.98■□□□□ 0.95
PACS1Q6VY07 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.98■□□□□ 0.95
PACS1Q6VY07 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PACS1Q6VY07 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.98■□□□□ 0.95
PACS1Q6VY07 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.98■□□□□ 0.95
PACS1Q6VY07 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.98■□□□□ 0.95
PACS1Q6VY07 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PACS1Q6VY07 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PACS1Q6VY07 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.97■□□□□ 0.95
PACS1Q6VY07 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PACS1Q6VY07 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PACS1Q6VY07 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PACS1Q6VY07 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms