Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 AP004607.4-201ENST00000530158 1459 ntBASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF549Q6P9A3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 AL157384.1-201ENST00000445995 2473 ntBASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 AC104187.1-201ENST00000607510 612 ntBASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF549Q6P9A3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF549Q6P9A3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 KRT18P14-201ENST00000534205 1250 ntBASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF549Q6P9A3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 AC010141.2-201ENST00000452426 721 ntBASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 KRT18P61-201ENST00000585825 1298 ntBASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 AC006128.1-201ENST00000624704 1661 ntBASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ZNF549Q6P9A3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms