Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 AC139795.1-202ENST00000500444 432 ntBASIC19.65■□□□□ 0.74
LPCAT4Q643R3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LPCAT4Q643R3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
LPCAT4Q643R3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LPCAT4Q643R3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 AL031602.1-201ENST00000633169 911 ntBASIC19.64■□□□□ 0.73
LPCAT4Q643R3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 AC003102.1-202ENST00000563394 1796 ntBASIC19.64■□□□□ 0.73
LPCAT4Q643R3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT4Q643R3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.63■□□□□ 0.73
LPCAT4Q643R3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 TNXA-203ENST00000507684 2038 ntBASIC19.62■□□□□ 0.73
LPCAT4Q643R3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 AC121338.2-201ENST00000622535 1744 ntBASIC19.62■□□□□ 0.73
LPCAT4Q643R3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.62■□□□□ 0.73
LPCAT4Q643R3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 AC026471.1-201ENST00000564629 3026 ntBASIC19.61■□□□□ 0.73
LPCAT4Q643R3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 HSD17B1P1-201ENST00000590052 955 ntBASIC19.61■□□□□ 0.73
LPCAT4Q643R3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT4Q643R3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LPCAT4Q643R3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LPCAT4Q643R3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.6■□□□□ 0.73
LPCAT4Q643R3 KRT18P60-201ENST00000312876 1297 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms