Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 pRNA.6-201ENST00000610482 90 ntBASIC16.47■□□□□ 0.23
FAM78BQ5VT40 pRNA.5-201ENST00000612139 90 ntBASIC16.47■□□□□ 0.23
FAM78BQ5VT40 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 pRNA.11-201ENST00000618423 90 ntBASIC16.47■□□□□ 0.23
FAM78BQ5VT40 pRNA.13-201ENST00000619112 90 ntBASIC16.47■□□□□ 0.23
FAM78BQ5VT40 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 AC087289.5-201ENST00000586076 3175 ntBASIC16.47■□□□□ 0.23
FAM78BQ5VT40 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM78BQ5VT40 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 AL356441.2-201ENST00000443009 864 ntBASIC16.46■□□□□ 0.23
FAM78BQ5VT40 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM78BQ5VT40 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 AL034346.1-201ENST00000568244 1277 ntBASIC16.45■□□□□ 0.22
FAM78BQ5VT40 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 AL020996.1-203ENST00000536896 2307 ntBASIC16.45■□□□□ 0.22
FAM78BQ5VT40 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM78BQ5VT40 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 GABARAPL3-202ENST00000624044 1851 ntBASIC16.44■□□□□ 0.22
FAM78BQ5VT40 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 MIR3621-201ENST00000580529 85 ntBASIC16.44■□□□□ 0.22
FAM78BQ5VT40 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM78BQ5VT40 AC003102.1-202ENST00000563394 1796 ntBASIC16.43■□□□□ 0.22
FAM78BQ5VT40 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms