Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI3Q3KNW1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 POU5F1P4-201ENST00000413175 1085 ntBASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 AC010141.2-201ENST00000452426 721 ntBASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 AC004854.2-201ENST00000608450 1441 ntBASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 AL157384.1-201ENST00000445995 2473 ntBASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.05■□□□□ 0.48
SNAI3Q3KNW1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI3Q3KNW1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 DUX4L2-201ENST00000561772 1275 ntBASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 DUX4L6-201ENST00000626483 1275 ntBASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 DUX4L1-201ENST00000627662 1275 ntBASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 DUX4L8-201ENST00000629013 1275 ntBASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 DUX4L3-201ENST00000630187 1275 ntBASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 DUX4L7-201ENST00000630678 1275 ntBASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 DUX4L5-201ENST00000630834 1275 ntBASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 AC121338.2-201ENST00000622535 1744 ntBASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 AC006128.1-201ENST00000624704 1661 ntBASIC18.03■□□□□ 0.48
SNAI3Q3KNW1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms