Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH17Q12864 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDH17Q12864 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH17Q12864 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH17Q12864 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH17Q12864 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH17Q12864 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDH17Q12864 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH17Q12864 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH17Q12864 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.03■□□□□ 0.96
CDH17Q12864 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDH17Q12864 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH17Q12864 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.03■□□□□ 0.96
CDH17Q12864 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.03■□□□□ 0.96
CDH17Q12864 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH17Q12864 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH17Q12864 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDH17Q12864 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH17Q12864 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH17Q12864 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH17Q12864 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH17Q12864 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH17Q12864 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CDH17Q12864 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDH17Q12864 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDH17Q12864 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CDH17Q12864 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.02■□□□□ 0.96
CDH17Q12864 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH17Q12864 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 AC010141.2-201ENST00000452426 721 ntBASIC21.02■□□□□ 0.96
CDH17Q12864 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH17Q12864 CCDC92B-201ENST00000575506 885 ntBASIC21.02■□□□□ 0.96
CDH17Q12864 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH17Q12864 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH17Q12864 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.02■□□□□ 0.96
CDH17Q12864 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDH17Q12864 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDH17Q12864 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDH17Q12864 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH17Q12864 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH17Q12864 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH17Q12864 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH17Q12864 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.01■□□□□ 0.95
CDH17Q12864 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH17Q12864 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.01■□□□□ 0.95
CDH17Q12864 DUX4L2-201ENST00000561772 1275 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH17Q12864 AC104187.1-201ENST00000607510 612 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
CDH17Q12864 AC120498.10-201ENST00000621827 505 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 DUX4L6-201ENST00000626483 1275 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 DUX4L1-201ENST00000627662 1275 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 DUX4L8-201ENST00000629013 1275 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 DUX4L3-201ENST00000630187 1275 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 DUX4L7-201ENST00000630678 1275 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 DUX4L5-201ENST00000630834 1275 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.01■□□□□ 0.95
CDH17Q12864 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.01■□□□□ 0.95
CDH17Q12864 KRT16P2-201ENST00000414673 1423 ntBASIC21.01■□□□□ 0.95
CDH17Q12864 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH17Q12864 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH17Q12864 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH17Q12864 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH17Q12864 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH17Q12864 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH17Q12864 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDH17Q12864 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CDH17Q12864 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CDH17Q12864 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21■□□□□ 0.95
CDH17Q12864 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH17Q12864 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH17Q12864 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21■□□□□ 0.95
CDH17Q12864 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21■□□□□ 0.95
CDH17Q12864 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH17Q12864 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDH17Q12864 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDH17Q12864 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CDH17Q12864 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21■□□□□ 0.95
CDH17Q12864 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21■□□□□ 0.95
CDH17Q12864 KRT18P14-201ENST00000534205 1250 ntBASIC21■□□□□ 0.95
CDH17Q12864 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH17Q12864 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH17Q12864 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH17Q12864 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21■□□□□ 0.95
CDH17Q12864 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21■□□□□ 0.95
CDH17Q12864 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21■□□□□ 0.95
CDH17Q12864 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDH17Q12864 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH17Q12864 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms