Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 FANCA-229ENST00000567988 915 ntTSL 510.8□□□□□ -0.684e-7■■■□□ 15.9
LSM11P83369 NECAB3-218ENST00000606525 2010 ntTSL 217.54■□□□□ 0.41e-7■■■□□ 15.9
LSM11P83369 NECAB3-206ENST00000477778 462 ntTSL 310.52□□□□□ -0.731e-7■■■□□ 15.9
LSM11P83369 MOV10-214ENST00000490413 1370 ntTSL 212.9□□□□□ -0.341e-6■■■□□ 15.9
LSM11P83369 MOV10-216ENST00000495374 705 ntTSL 212.59□□□□□ -0.391e-6■■■□□ 15.9
LSM11P83369 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.541e-6■■■□□ 15.9
LSM11P83369 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.631e-6■■■□□ 15.9
LSM11P83369 MOV10-201ENST00000357443 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.861e-6■■■□□ 15.9
LSM11P83369 MOV10-215ENST00000494319 720 ntTSL 29.44□□□□□ -0.91e-6■■■□□ 15.9
LSM11P83369 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC8.78□□□□□ -11e-6■■■□□ 15.9
LSM11P83369 MOV10-217ENST00000496577 4312 ntTSL 28.2□□□□□ -1.11e-6■■■□□ 15.9
LSM11P83369 MOV10-206ENST00000468624 4689 ntTSL 58.07□□□□□ -1.121e-6■■■□□ 15.9
LSM11P83369 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.45■□□□□ 0.382e-7■■■□□ 15.9
LSM11P83369 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.362e-7■■■□□ 15.9
LSM11P83369 ANKRD10-206ENST00000465753 997 ntTSL 1 (best)16.5■□□□□ 0.232e-7■■■□□ 15.9
LSM11P83369 ANKRD10-211ENST00000603993 704 ntTSL 214.78□□□□□ -0.042e-7■■■□□ 15.9
LSM11P83369 ANKRD10-209ENST00000489973 745 ntTSL 37.85□□□□□ -1.152e-7■■■□□ 15.9
LSM11P83369 ANKRD10-207ENST00000475809 446 ntTSL 27.39□□□□□ -1.232e-7■■■□□ 15.9
LSM11P83369 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.43■■□□□ 1.52e-6■■■□□ 15.9
LSM11P83369 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.432e-6■■■□□ 15.9
LSM11P83369 KDM4B-210ENST00000592175 562 ntTSL 414.12□□□□□ -0.152e-6■■■□□ 15.9
LSM11P83369 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.221e-6■■■□□ 15.9
LSM11P83369 NOL4L-208ENST00000475781 1127 ntTSL 515.33■□□□□ 0.041e-6■■■□□ 15.9
LSM11P83369 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.92□□□□□ -0.021e-6■■■□□ 15.9
LSM11P83369 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.14□□□□□ -0.311e-6■■■□□ 15.9
LSM11P83369 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC10.77□□□□□ -0.691e-6■■■□□ 15.9
LSM11P83369 NOL4L-204ENST00000375677 541 ntTSL 310.36□□□□□ -0.751e-6■■■□□ 15.9
LSM11P83369 LARP1-215ENST00000524248 2128 ntTSL 515.77■□□□□ 0.125e-7■■■□□ 15.8
LSM11P83369 POLD1-204ENST00000593981 873 ntTSL 517.14■□□□□ 0.334e-6■■■□□ 15.8
LSM11P83369 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.044e-6■■■□□ 15.8
LSM11P83369 POLD1-209ENST00000597963 737 ntTSL 215.19■□□□□ 0.024e-6■■■□□ 15.8
LSM11P83369 POLD1-212ENST00000600859 3474 ntTSL 213.35□□□□□ -0.274e-6■■■□□ 15.8
LSM11P83369 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.99□□□□□ -0.334e-6■■■□□ 15.8
LSM11P83369 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.354e-6■■■□□ 15.8
LSM11P83369 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.75□□□□□ -0.374e-6■■■□□ 15.8
LSM11P83369 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.384e-6■■■□□ 15.8
LSM11P83369 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.67□□□□□ -0.382e-6■■■□□ 15.8
LSM11P83369 MICALL2-202ENST00000413446 3046 ntTSL 212.81□□□□□ -0.365e-9■■■□□ 15.8
LSM11P83369 WDR4-206ENST00000479429 759 ntTSL 519.59■□□□□ 0.734e-6■■■□□ 15.8
LSM11P83369 WDR4-204ENST00000470658 901 ntTSL 518.2■□□□□ 0.54e-6■■■□□ 15.8
LSM11P83369 ANAPC2-205ENST00000487917 1972 ntTSL 217.05■□□□□ 0.327e-8■■■□□ 15.8
LSM11P83369 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.217e-8■■■□□ 15.8
LSM11P83369 CCNL2-220ENST00000505849 1503 ntTSL 214.42□□□□□ -0.15e-9■■■□□ 15.8
LSM11P83369 WDR6-216ENST00000489684 1155 ntTSL 214.29□□□□□ -0.127e-8■■■□□ 15.8
LSM11P83369 WDR4-203ENST00000463902 609 ntTSL 311.91□□□□□ -0.54e-6■■■□□ 15.8
LSM11P83369 WDR6-211ENST00000471162 3565 ntTSL 1 (best)11.58□□□□□ -0.563e-8■■■□□ 15.8
LSM11P83369 WDR6-204ENST00000420783 3656 ntTSL 1 (best)11.45□□□□□ -0.583e-8■■■□□ 15.8
LSM11P83369 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC10.93□□□□□ -0.663e-8■■■□□ 15.8
LSM11P83369 KAT2A-205ENST00000592310 596 ntTSL 310.77□□□□□ -0.693e-9■■■□□ 15.8
LSM11P83369 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.82■□□□□ 0.61e-14■■■□□ 15.8
LSM11P83369 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.43■□□□□ 0.221e-14■■■□□ 15.8
LSM11P83369 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.55■□□□□ 0.081e-14■■■□□ 15.8
LSM11P83369 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.061e-14■■■□□ 15.8
LSM11P83369 C22orf39-204ENST00000509549 2979 ntTSL 211.22□□□□□ -0.611e-14■■■□□ 15.8
LSM11P83369 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC11.12□□□□□ -0.631e-14■■■□□ 15.8
LSM11P83369 HIRA-203ENST00000452818 453 ntTSL 59.73□□□□□ -0.851e-14■■■□□ 15.8
LSM11P83369 SRRT-211ENST00000478693 655 ntTSL 210.09□□□□□ -0.791e-11■■■□□ 15.8
LSM11P83369 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.357e-9■■■□□ 15.8
LSM11P83369 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.64□□□□□ -0.397e-9■■■□□ 15.8
LSM11P83369 SECISBP2-209ENST00000534113 3584 ntTSL 2 BASIC10.47□□□□□ -0.737e-9■■■□□ 15.8
LSM11P83369 C4BPB-206ENST00000469326 1992 ntTSL 29.37□□□□□ -0.917e-9■■■□□ 15.8
LSM11P83369 C4BPB-204ENST00000391923 949 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.927e-9■■■□□ 15.8
LSM11P83369 C4BPB-207ENST00000470767 652 ntTSL 29.03□□□□□ -0.967e-9■■■□□ 15.8
LSM11P83369 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.017e-9■■■□□ 15.8
LSM11P83369 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.037e-9■■■□□ 15.8
LSM11P83369 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.087e-9■■■□□ 15.8
LSM11P83369 CTBP2-206ENST00000460976 603 ntTSL 522.8■■□□□ 1.244e-6■■■□□ 15.8
LSM11P83369 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.051e-6■■■□□ 15.8
LSM11P83369 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.31e-6■■■□□ 15.8
LSM11P83369 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC11.54□□□□□ -0.561e-6■■■□□ 15.8
LSM11P83369 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.56■□□□□ 0.081e-11■■■□□ 15.7
LSM11P83369 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.52■□□□□ 0.081e-11■■■□□ 15.7
LSM11P83369 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.061e-11■■■□□ 15.7
LSM11P83369 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.021e-11■■■□□ 15.7
LSM11P83369 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.05■□□□□ 01e-11■■■□□ 15.7
LSM11P83369 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.05■□□□□ 01e-11■■■□□ 15.7
LSM11P83369 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.161e-11■■■□□ 15.7
LSM11P83369 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.66□□□□□ -0.221e-11■■■□□ 15.7
LSM11P83369 TPD52L2-208ENST00000474176 4053 ntTSL 29.9□□□□□ -0.831e-11■■■□□ 15.7
LSM11P83369 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.411e-6■■■□□ 15.7
LSM11P83369 PSME2-203ENST00000558273 1502 ntTSL 213.61□□□□□ -0.232e-8■■■□□ 15.7
LSM11P83369 PSME2-204ENST00000558931 2754 ntTSL 513.26□□□□□ -0.292e-8■■■□□ 15.7
LSM11P83369 PSME2-202ENST00000471700 706 ntTSL 312.27□□□□□ -0.452e-8■■■□□ 15.7
LSM11P83369 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.522e-8■■■□□ 15.7
LSM11P83369 PSME2-217ENST00000615264 874 ntTSL 5 BASIC10.81□□□□□ -0.682e-8■■■□□ 15.7
LSM11P83369 PSME2-213ENST00000560410 755 ntTSL 3 BASIC10.31□□□□□ -0.762e-8■■■□□ 15.7
LSM11P83369 PSME2-209ENST00000559453 1721 ntTSL 59.59□□□□□ -0.872e-8■■■□□ 15.7
LSM11P83369 LTBP3-218ENST00000530866 3756 ntTSL 211.96□□□□□ -0.52e-7■■■□□ 15.7
LSM11P83369 NFIC-211ENST00000641145 8399 ntBASIC14.89□□□□□ -0.032e-6■■■□□ 15.7
LSM11P83369 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.77□□□□□ -0.362e-6■■■□□ 15.7
LSM11P83369 AP1G2-214ENST00000554892 658 ntTSL 29.4□□□□□ -0.97e-12■■■□□ 15.7
LSM11P83369 MCM7-209ENST00000485286 2900 ntTSL 216.69■□□□□ 0.262e-6■■■□□ 15.7
LSM11P83369 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.01■□□□□ 0.152e-6■■■□□ 15.7
LSM11P83369 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.31□□□□□ -0.122e-6■■■□□ 15.7
LSM11P83369 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.15□□□□□ -0.462e-6■■■□□ 15.7
LSM11P83369 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.562e-6■■■□□ 15.7
LSM11P83369 MCM7-210ENST00000489841 2515 ntTSL 1 (best)9.55□□□□□ -0.882e-6■■■□□ 15.7
LSM11P83369 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.823e-10■■■□□ 15.7
LSM11P83369 NKTR-202ENST00000429888 7325 ntTSL 53.52□□□□□ -1.853e-10■■■□□ 15.7
LSM11P83369 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.48□□□□□ -1.853e-10■■■□□ 15.7
Retrieved 100 of 11,495 protein–RNA pairs in 62.6 ms