Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC107956.1-201ENST00000494359 873 ntBASIC25.06■■□□□ 1.6
CNTNAP1P78357 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.06■■□□□ 1.6
CNTNAP1P78357 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.06■■□□□ 1.6
CNTNAP1P78357 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CNTNAP1P78357 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CNTNAP1P78357 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CNTNAP1P78357 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.06■■□□□ 1.6
CNTNAP1P78357 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC25.05■■□□□ 1.6
CNTNAP1P78357 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.05■■□□□ 1.6
CNTNAP1P78357 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.05■■□□□ 1.6
CNTNAP1P78357 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.05■■□□□ 1.6
CNTNAP1P78357 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CNTNAP1P78357 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
CNTNAP1P78357 AC069544.1-201ENST00000609399 999 ntBASIC25.05■■□□□ 1.6
CNTNAP1P78357 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CNTNAP1P78357 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CNTNAP1P78357 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
CNTNAP1P78357 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
CNTNAP1P78357 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CNTNAP1P78357 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CNTNAP1P78357 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CNTNAP1P78357 TSPY15P-201ENST00000457163 923 ntBASIC25.04■■□□□ 1.6
CNTNAP1P78357 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.04■■□□□ 1.6
CNTNAP1P78357 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.04■■□□□ 1.6
CNTNAP1P78357 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.04■■□□□ 1.6
CNTNAP1P78357 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.04■■□□□ 1.6
CNTNAP1P78357 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CNTNAP1P78357 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CNTNAP1P78357 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CNTNAP1P78357 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CNTNAP1P78357 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CNTNAP1P78357 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CNTNAP1P78357 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CNTNAP1P78357 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CNTNAP1P78357 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CNTNAP1P78357 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CNTNAP1P78357 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.02■■□□□ 1.6
CNTNAP1P78357 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CNTNAP1P78357 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CNTNAP1P78357 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CNTNAP1P78357 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CNTNAP1P78357 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.02■■□□□ 1.6
CNTNAP1P78357 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CNTNAP1P78357 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.02■■□□□ 1.6
CNTNAP1P78357 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.02■■□□□ 1.6
CNTNAP1P78357 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CNTNAP1P78357 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.01■■□□□ 1.59
CNTNAP1P78357 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.01■■□□□ 1.59
CNTNAP1P78357 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.01■■□□□ 1.59
CNTNAP1P78357 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.01■■□□□ 1.59
CNTNAP1P78357 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
CNTNAP1P78357 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CNTNAP1P78357 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CNTNAP1P78357 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
CNTNAP1P78357 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
CNTNAP1P78357 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25■■□□□ 1.59
CNTNAP1P78357 PNMA6B-201ENST00000538162 1200 ntBASIC25■■□□□ 1.59
CNTNAP1P78357 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25■■□□□ 1.59
CNTNAP1P78357 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25■■□□□ 1.59
CNTNAP1P78357 AL590326.2-201ENST00000625139 305 ntBASIC25■■□□□ 1.59
CNTNAP1P78357 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
CNTNAP1P78357 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25■■□□□ 1.59
CNTNAP1P78357 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CNTNAP1P78357 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CNTNAP1P78357 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CNTNAP1P78357 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.99■■□□□ 1.59
CNTNAP1P78357 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CNTNAP1P78357 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC24.99■■□□□ 1.59
CNTNAP1P78357 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.99■■□□□ 1.59
CNTNAP1P78357 MIR4785-201ENST00000585005 73 ntBASIC24.99■■□□□ 1.59
CNTNAP1P78357 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.99■■□□□ 1.59
CNTNAP1P78357 AL049637.2-201ENST00000641778 930 ntBASIC24.99■■□□□ 1.59
CNTNAP1P78357 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.98■■□□□ 1.59
CNTNAP1P78357 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CNTNAP1P78357 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CNTNAP1P78357 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CNTNAP1P78357 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC24.98■■□□□ 1.59
CNTNAP1P78357 KRT17P1-201ENST00000399211 1546 ntBASIC24.98■■□□□ 1.59
CNTNAP1P78357 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.98■■□□□ 1.59
CNTNAP1P78357 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CNTNAP1P78357 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms