Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SIRPAP78324 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SIRPAP78324 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPAP78324 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPAP78324 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.98■□□□□ 0.63
SIRPAP78324 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SIRPAP78324 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPAP78324 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPAP78324 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SIRPAP78324 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPAP78324 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPAP78324 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.97■□□□□ 0.63
SIRPAP78324 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SIRPAP78324 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
SIRPAP78324 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.97■□□□□ 0.63
SIRPAP78324 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.97■□□□□ 0.63
SIRPAP78324 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.97■□□□□ 0.63
SIRPAP78324 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.97■□□□□ 0.63
SIRPAP78324 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SIRPAP78324 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SIRPAP78324 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPAP78324 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.97■□□□□ 0.63
SIRPAP78324 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SIRPAP78324 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.96■□□□□ 0.63
SIRPAP78324 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SIRPAP78324 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.96■□□□□ 0.63
SIRPAP78324 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPAP78324 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPAP78324 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPAP78324 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SIRPAP78324 AC006015.1-201ENST00000429970 570 ntBASIC18.96■□□□□ 0.63
SIRPAP78324 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPAP78324 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
SIRPAP78324 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.96■□□□□ 0.63
SIRPAP78324 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.96■□□□□ 0.63
SIRPAP78324 AC073130.3-201ENST00000624389 2278 ntBASIC18.96■□□□□ 0.63
SIRPAP78324 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SIRPAP78324 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPAP78324 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPAP78324 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.96■□□□□ 0.63
SIRPAP78324 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPAP78324 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPAP78324 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.95■□□□□ 0.62
SIRPAP78324 AP006587.3-201ENST00000525742 1516 ntBASIC18.95■□□□□ 0.62
SIRPAP78324 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPAP78324 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SIRPAP78324 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.95■□□□□ 0.62
SIRPAP78324 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.95■□□□□ 0.62
SIRPAP78324 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.95■□□□□ 0.62
SIRPAP78324 AC080038.1-201ENST00000611274 1154 ntBASIC18.95■□□□□ 0.62
SIRPAP78324 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SIRPAP78324 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPAP78324 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPAP78324 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SIRPAP78324 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPAP78324 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPAP78324 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.94■□□□□ 0.62
SIRPAP78324 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.94■□□□□ 0.62
SIRPAP78324 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPAP78324 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.94■□□□□ 0.62
SIRPAP78324 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPAP78324 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPAP78324 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SIRPAP78324 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPAP78324 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPAP78324 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.94■□□□□ 0.62
SIRPAP78324 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.94■□□□□ 0.62
SIRPAP78324 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.94■□□□□ 0.62
SIRPAP78324 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.94■□□□□ 0.62
SIRPAP78324 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPAP78324 BID-214ENST00000617586 542 ntTSL 5 BASIC18.94■□□□□ 0.62
SIRPAP78324 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPAP78324 AC026471.6-201ENST00000622954 1905 ntBASIC18.94■□□□□ 0.62
SIRPAP78324 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SIRPAP78324 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPAP78324 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.93■□□□□ 0.62
SIRPAP78324 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.93■□□□□ 0.62
SIRPAP78324 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPAP78324 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.93■□□□□ 0.62
SIRPAP78324 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPAP78324 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.93■□□□□ 0.62
SIRPAP78324 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPAP78324 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.93■□□□□ 0.62
SIRPAP78324 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPAP78324 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.93■□□□□ 0.62
SIRPAP78324 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPAP78324 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.93■□□□□ 0.62
SIRPAP78324 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.93■□□□□ 0.62
SIRPAP78324 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms