Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SUPT4H1P63272 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SUPT4H1P63272 FP700111.2-201ENST00000619190 1892 ntBASIC17.18■□□□□ 0.34
SUPT4H1P63272 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.18■□□□□ 0.34
SUPT4H1P63272 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SUPT4H1P63272 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.18■□□□□ 0.34
SUPT4H1P63272 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SUPT4H1P63272 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.18■□□□□ 0.34
SUPT4H1P63272 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.18■□□□□ 0.34
SUPT4H1P63272 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SUPT4H1P63272 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SUPT4H1P63272 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SUPT4H1P63272 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SUPT4H1P63272 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SUPT4H1P63272 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SUPT4H1P63272 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SUPT4H1P63272 TSPY9P-201ENST00000440215 945 ntBASIC17.17■□□□□ 0.34
SUPT4H1P63272 TSPY11P-201ENST00000442607 1045 ntBASIC17.17■□□□□ 0.34
SUPT4H1P63272 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.17■□□□□ 0.34
SUPT4H1P63272 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SUPT4H1P63272 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SUPT4H1P63272 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SUPT4H1P63272 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.17■□□□□ 0.34
SUPT4H1P63272 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SUPT4H1P63272 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SUPT4H1P63272 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SUPT4H1P63272 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SUPT4H1P63272 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SUPT4H1P63272 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SUPT4H1P63272 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SUPT4H1P63272 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SUPT4H1P63272 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SUPT4H1P63272 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.16■□□□□ 0.34
SUPT4H1P63272 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SUPT4H1P63272 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.16■□□□□ 0.34
SUPT4H1P63272 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.16■□□□□ 0.34
SUPT4H1P63272 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SUPT4H1P63272 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SUPT4H1P63272 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SUPT4H1P63272 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SUPT4H1P63272 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SUPT4H1P63272 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.15■□□□□ 0.34
SUPT4H1P63272 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.15■□□□□ 0.34
SUPT4H1P63272 MIR6724-1-201ENST00000616420 92 ntBASIC17.15■□□□□ 0.34
SUPT4H1P63272 MIR6724-2-201ENST00000616483 92 ntBASIC17.15■□□□□ 0.34
SUPT4H1P63272 MIR6724-4-201ENST00000617390 92 ntBASIC17.15■□□□□ 0.34
SUPT4H1P63272 MIR6724-3-201ENST00000622482 92 ntBASIC17.15■□□□□ 0.34
SUPT4H1P63272 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SUPT4H1P63272 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SUPT4H1P63272 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.15■□□□□ 0.34
SUPT4H1P63272 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SUPT4H1P63272 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.15■□□□□ 0.34
SUPT4H1P63272 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.14■□□□□ 0.34
SUPT4H1P63272 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUPT4H1P63272 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.14■□□□□ 0.33
SUPT4H1P63272 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SUPT4H1P63272 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUPT4H1P63272 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUPT4H1P63272 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUPT4H1P63272 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms