Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.81■□□□□ 0.76
SKP1P63208 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKP1P63208 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.8■□□□□ 0.76
SKP1P63208 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 IKBKGP1-201ENST00000612193 1073 ntBASIC19.8■□□□□ 0.76
SKP1P63208 AC010536.3-201ENST00000620306 533 ntBASIC19.8■□□□□ 0.76
SKP1P63208 AC013268.1-206ENST00000638368 961 ntBASIC19.8■□□□□ 0.76
SKP1P63208 AC112229.1-201ENST00000639295 961 ntBASIC19.8■□□□□ 0.76
SKP1P63208 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.8■□□□□ 0.76
SKP1P63208 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SKP1P63208 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKP1P63208 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.8■□□□□ 0.76
SKP1P63208 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKP1P63208 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SKP1P63208 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.8■□□□□ 0.76
SKP1P63208 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKP1P63208 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKP1P63208 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKP1P63208 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.79■□□□□ 0.76
SKP1P63208 AC004911.1-201ENST00000416316 871 ntBASIC19.79■□□□□ 0.76
SKP1P63208 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.79■□□□□ 0.76
SKP1P63208 MFSD11-216ENST00000590393 1141 ntBASIC19.79■□□□□ 0.76
SKP1P63208 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.79■□□□□ 0.76
SKP1P63208 AC231657.2-201ENST00000624556 255 ntBASIC19.79■□□□□ 0.76
SKP1P63208 AC092437.1-201ENST00000624794 1048 ntBASIC19.79■□□□□ 0.76
SKP1P63208 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKP1P63208 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKP1P63208 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.79■□□□□ 0.76
SKP1P63208 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKP1P63208 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.79■□□□□ 0.76
SKP1P63208 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKP1P63208 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKP1P63208 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SKP1P63208 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.78■□□□□ 0.76
SKP1P63208 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.78■□□□□ 0.76
SKP1P63208 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SKP1P63208 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SKP1P63208 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SKP1P63208 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SKP1P63208 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.77■□□□□ 0.76
SKP1P63208 Z98882.1-201ENST00000622160 2253 ntBASIC19.77■□□□□ 0.76
SKP1P63208 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SKP1P63208 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SKP1P63208 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SKP1P63208 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SKP1P63208 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SKP1P63208 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SKP1P63208 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SKP1P63208 AC080038.1-201ENST00000611274 1154 ntBASIC19.77■□□□□ 0.76
SKP1P63208 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SKP1P63208 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SKP1P63208 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.77■□□□□ 0.75
SKP1P63208 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
SKP1P63208 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SKP1P63208 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SKP1P63208 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SKP1P63208 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.76■□□□□ 0.75
SKP1P63208 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SKP1P63208 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.76■□□□□ 0.75
SKP1P63208 TERF1P5-201ENST00000477545 1207 ntBASIC19.76■□□□□ 0.75
SKP1P63208 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.76■□□□□ 0.75
SKP1P63208 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.76■□□□□ 0.75
SKP1P63208 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SKP1P63208 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.76■□□□□ 0.75
SKP1P63208 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.76■□□□□ 0.75
SKP1P63208 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.76■□□□□ 0.75
SKP1P63208 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SKP1P63208 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SKP1P63208 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SKP1P63208 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SKP1P63208 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SKP1P63208 LINC00565-201ENST00000562710 2331 ntBASIC19.76■□□□□ 0.75
SKP1P63208 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SKP1P63208 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.76■□□□□ 0.75
SKP1P63208 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SKP1P63208 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.76■□□□□ 0.75
SKP1P63208 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SKP1P63208 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms