Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
WNT3AP56704 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.07■□□□□ 0.96
WNT3AP56704 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
WNT3AP56704 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
WNT3AP56704 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.07■□□□□ 0.96
WNT3AP56704 KRT18P20-201ENST00000548986 1279 ntBASIC21.07■□□□□ 0.96
WNT3AP56704 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.07■□□□□ 0.96
WNT3AP56704 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
WNT3AP56704 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.07■□□□□ 0.96
WNT3AP56704 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
WNT3AP56704 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
WNT3AP56704 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 KRT18P5-201ENST00000436075 1291 ntBASIC21.06■□□□□ 0.96
WNT3AP56704 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.06■□□□□ 0.96
WNT3AP56704 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.06■□□□□ 0.96
WNT3AP56704 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
WNT3AP56704 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
WNT3AP56704 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
WNT3AP56704 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
WNT3AP56704 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.05■□□□□ 0.96
WNT3AP56704 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
WNT3AP56704 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
WNT3AP56704 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.05■□□□□ 0.96
WNT3AP56704 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.05■□□□□ 0.96
WNT3AP56704 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.04■□□□□ 0.96
WNT3AP56704 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
WNT3AP56704 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.04■□□□□ 0.96
WNT3AP56704 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
WNT3AP56704 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
WNT3AP56704 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
WNT3AP56704 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.03■□□□□ 0.96
WNT3AP56704 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.03■□□□□ 0.96
WNT3AP56704 RARRES2P11-201ENST00000635158 484 ntBASIC21.03■□□□□ 0.96
WNT3AP56704 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
WNT3AP56704 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
WNT3AP56704 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
WNT3AP56704 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
WNT3AP56704 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
WNT3AP56704 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.03■□□□□ 0.96
WNT3AP56704 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
WNT3AP56704 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
WNT3AP56704 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
WNT3AP56704 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
WNT3AP56704 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
WNT3AP56704 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.02■□□□□ 0.96
WNT3AP56704 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.02■□□□□ 0.96
WNT3AP56704 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.02■□□□□ 0.96
WNT3AP56704 AC245052.3-201ENST00000450182 901 ntBASIC21.02■□□□□ 0.96
WNT3AP56704 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.02■□□□□ 0.96
WNT3AP56704 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
WNT3AP56704 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.02■□□□□ 0.96
WNT3AP56704 MIR5787-201ENST00000611784 55 ntBASIC21.02■□□□□ 0.96
WNT3AP56704 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.02■□□□□ 0.96
WNT3AP56704 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
WNT3AP56704 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
WNT3AP56704 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
WNT3AP56704 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
WNT3AP56704 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.02■□□□□ 0.96
WNT3AP56704 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
WNT3AP56704 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.02■□□□□ 0.95
WNT3AP56704 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
WNT3AP56704 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
WNT3AP56704 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
WNT3AP56704 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.01■□□□□ 0.95
WNT3AP56704 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.01■□□□□ 0.95
WNT3AP56704 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms