Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.55■□□□□ 0.08
CMC4P56277 AC013268.1-206ENST00000638368 961 ntBASIC15.55■□□□□ 0.08
CMC4P56277 AC112229.1-201ENST00000639295 961 ntBASIC15.55■□□□□ 0.08
CMC4P56277 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CMC4P56277 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMC4P56277 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.54■□□□□ 0.08
CMC4P56277 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CMC4P56277 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.54■□□□□ 0.08
CMC4P56277 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CMC4P56277 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.54■□□□□ 0.08
CMC4P56277 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.54■□□□□ 0.08
CMC4P56277 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 CDV3P1-201ENST00000471403 739 ntBASIC15.54■□□□□ 0.08
CMC4P56277 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.54■□□□□ 0.08
CMC4P56277 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.54■□□□□ 0.08
CMC4P56277 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CMC4P56277 KRT18P61-201ENST00000585825 1298 ntBASIC15.54■□□□□ 0.08
CMC4P56277 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.54■□□□□ 0.08
CMC4P56277 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.54■□□□□ 0.08
CMC4P56277 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CMC4P56277 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CMC4P56277 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CMC4P56277 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CMC4P56277 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CMC4P56277 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CMC4P56277 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.53■□□□□ 0.08
CMC4P56277 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.53■□□□□ 0.08
CMC4P56277 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.53■□□□□ 0.08
CMC4P56277 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.53■□□□□ 0.08
CMC4P56277 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.53■□□□□ 0.08
CMC4P56277 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.53■□□□□ 0.08
CMC4P56277 AL162412.1-201ENST00000567129 965 ntBASIC15.53■□□□□ 0.08
CMC4P56277 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CMC4P56277 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CMC4P56277 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CMC4P56277 EP400NL-214ENST00000641289 2402 ntBASIC15.53■□□□□ 0.08
CMC4P56277 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CMC4P56277 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CMC4P56277 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CMC4P56277 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.52■□□□□ 0.08
CMC4P56277 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CMC4P56277 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CMC4P56277 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CMC4P56277 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CMC4P56277 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CMC4P56277 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.52■□□□□ 0.08
CMC4P56277 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.52■□□□□ 0.08
CMC4P56277 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.52■□□□□ 0.08
CMC4P56277 AC007322.1-201ENST00000426983 750 ntBASIC15.52■□□□□ 0.08
CMC4P56277 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CMC4P56277 AC007322.4-201ENST00000509611 723 ntBASIC15.52■□□□□ 0.08
CMC4P56277 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.52■□□□□ 0.08
CMC4P56277 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.52■□□□□ 0.08
CMC4P56277 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.52■□□□□ 0.08
CMC4P56277 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.52■□□□□ 0.08
CMC4P56277 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CMC4P56277 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.52■□□□□ 0.07
CMC4P56277 FBXW4P1-201ENST00000426721 2239 ntBASIC15.52■□□□□ 0.07
CMC4P56277 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CMC4P56277 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CMC4P56277 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.52■□□□□ 0.07
CMC4P56277 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CMC4P56277 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CMC4P56277 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CMC4P56277 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CMC4P56277 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.51■□□□□ 0.07
CMC4P56277 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.51■□□□□ 0.07
CMC4P56277 AC004911.1-201ENST00000416316 871 ntBASIC15.51■□□□□ 0.07
CMC4P56277 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.51■□□□□ 0.07
CMC4P56277 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.51■□□□□ 0.07
CMC4P56277 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.51■□□□□ 0.07
CMC4P56277 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.51■□□□□ 0.07
CMC4P56277 AL591742.1-201ENST00000604433 565 ntBASIC15.51■□□□□ 0.07
CMC4P56277 AC080038.1-201ENST00000611274 1154 ntBASIC15.51■□□□□ 0.07
CMC4P56277 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms