Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH11P55287 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH11P55287 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH11P55287 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH11P55287 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH11P55287 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH11P55287 AP005435.1-201ENST00000529293 1178 ntBASIC19.02■□□□□ 0.64
CDH11P55287 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH11P55287 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.02■□□□□ 0.64
CDH11P55287 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH11P55287 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH11P55287 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH11P55287 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH11P55287 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH11P55287 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH11P55287 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDH11P55287 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CDH11P55287 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH11P55287 AL354811.1-201ENST00000610286 706 ntBASIC19.01■□□□□ 0.63
CDH11P55287 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH11P55287 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
CDH11P55287 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
CDH11P55287 AC003102.1-202ENST00000563394 1796 ntBASIC19.01■□□□□ 0.63
CDH11P55287 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH11P55287 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH11P55287 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDH11P55287 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 AC034268.1-201ENST00000441047 882 ntBASIC19■□□□□ 0.63
CDH11P55287 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDH11P55287 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 AC092667.1-201ENST00000434301 2586 ntBASIC19■□□□□ 0.63
CDH11P55287 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDH11P55287 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDH11P55287 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH11P55287 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDH11P55287 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CDH11P55287 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH11P55287 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH11P55287 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH11P55287 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH11P55287 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH11P55287 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDH11P55287 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.99■□□□□ 0.63
CDH11P55287 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH11P55287 AC027612.3-201ENST00000413684 1047 ntBASIC18.99■□□□□ 0.63
CDH11P55287 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH11P55287 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH11P55287 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH11P55287 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH11P55287 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH11P55287 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CDH11P55287 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH11P55287 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH11P55287 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH11P55287 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH11P55287 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH11P55287 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDH11P55287 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.98■□□□□ 0.63
CDH11P55287 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.98■□□□□ 0.63
CDH11P55287 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CDH11P55287 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDH11P55287 AP004607.7-201ENST00000527152 1677 ntBASIC18.98■□□□□ 0.63
CDH11P55287 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH11P55287 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms