Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATXN3P54252 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3P54252 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
ATXN3P54252 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.2■□□□□ 0.98
ATXN3P54252 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ATXN3P54252 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ATXN3P54252 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ATXN3P54252 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.2■□□□□ 0.98
ATXN3P54252 RNA5SP413-201ENST00000516373 109 ntBASIC21.2■□□□□ 0.98
ATXN3P54252 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3P54252 AC008687.6-201ENST00000596318 630 ntBASIC21.2■□□□□ 0.98
ATXN3P54252 AC010536.3-201ENST00000620306 533 ntBASIC21.2■□□□□ 0.98
ATXN3P54252 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3P54252 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3P54252 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3P54252 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATXN3P54252 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3P54252 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATXN3P54252 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3P54252 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3P54252 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3P54252 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3P54252 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3P54252 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.19■□□□□ 0.98
ATXN3P54252 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.19■□□□□ 0.98
ATXN3P54252 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3P54252 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
ATXN3P54252 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3P54252 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.19■□□□□ 0.98
ATXN3P54252 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3P54252 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.19■□□□□ 0.98
ATXN3P54252 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.19■□□□□ 0.98
ATXN3P54252 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATXN3P54252 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.18■□□□□ 0.98
ATXN3P54252 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.18■□□□□ 0.98
ATXN3P54252 ITM2C-210ENST00000620962 501 ntBASIC21.18■□□□□ 0.98
ATXN3P54252 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.18■□□□□ 0.98
ATXN3P54252 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3P54252 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.17■□□□□ 0.98
ATXN3P54252 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.17■□□□□ 0.98
ATXN3P54252 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.17■□□□□ 0.98
ATXN3P54252 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.17■□□□□ 0.98
ATXN3P54252 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ATXN3P54252 CNN2P6-201ENST00000439038 900 ntBASIC21.17■□□□□ 0.98
ATXN3P54252 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.17■□□□□ 0.98
ATXN3P54252 KRT18P20-201ENST00000548986 1279 ntBASIC21.17■□□□□ 0.98
ATXN3P54252 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.17■□□□□ 0.98
ATXN3P54252 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.17■□□□□ 0.98
ATXN3P54252 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.17■□□□□ 0.98
ATXN3P54252 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATXN3P54252 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.17■□□□□ 0.98
ATXN3P54252 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATXN3P54252 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3P54252 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATXN3P54252 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3P54252 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.16■□□□□ 0.98
ATXN3P54252 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.16■□□□□ 0.98
ATXN3P54252 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3P54252 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3P54252 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3P54252 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3P54252 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3P54252 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3P54252 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3P54252 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.15■□□□□ 0.98
ATXN3P54252 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3P54252 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3P54252 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ATXN3P54252 AC013268.1-206ENST00000638368 961 ntBASIC21.15■□□□□ 0.98
ATXN3P54252 AC112229.1-201ENST00000639295 961 ntBASIC21.15■□□□□ 0.98
ATXN3P54252 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3P54252 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
ATXN3P54252 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3P54252 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3P54252 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3P54252 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3P54252 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3P54252 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.14■□□□□ 0.98
ATXN3P54252 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN3P54252 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN3P54252 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms