Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.41
CLTCL1P53675 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC30.14■■■□□ 2.41
CLTCL1P53675 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.41
CLTCL1P53675 CYP21A1P-202ENST00000354927 1481 ntBASIC30.13■■■□□ 2.41
CLTCL1P53675 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CLTCL1P53675 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CLTCL1P53675 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CLTCL1P53675 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC30.13■■■□□ 2.41
CLTCL1P53675 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CLTCL1P53675 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CLTCL1P53675 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC30.13■■■□□ 2.41
CLTCL1P53675 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CLTCL1P53675 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CLTCL1P53675 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC30.13■■■□□ 2.41
CLTCL1P53675 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC30.13■■■□□ 2.41
CLTCL1P53675 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CLTCL1P53675 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CLTCL1P53675 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CLTCL1P53675 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CLTCL1P53675 PNMA6B-201ENST00000538162 1200 ntBASIC30.12■■■□□ 2.41
CLTCL1P53675 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CLTCL1P53675 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
CLTCL1P53675 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC30.12■■■□□ 2.41
CLTCL1P53675 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC30.12■■■□□ 2.41
CLTCL1P53675 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CLTCL1P53675 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CLTCL1P53675 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CLTCL1P53675 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CLTCL1P53675 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CLTCL1P53675 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CLTCL1P53675 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC30.11■■■□□ 2.41
CLTCL1P53675 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
CLTCL1P53675 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
CLTCL1P53675 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CLTCL1P53675 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC30.1■■■□□ 2.41
CLTCL1P53675 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CLTCL1P53675 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CLTCL1P53675 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CLTCL1P53675 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC30.1■■■□□ 2.41
CLTCL1P53675 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CLTCL1P53675 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CLTCL1P53675 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC30.1■■■□□ 2.41
CLTCL1P53675 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC30.1■■■□□ 2.41
CLTCL1P53675 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CLTCL1P53675 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CLTCL1P53675 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CLTCL1P53675 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.09■■■□□ 2.41
CLTCL1P53675 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CLTCL1P53675 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CLTCL1P53675 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CLTCL1P53675 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CLTCL1P53675 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC30.09■■■□□ 2.41
CLTCL1P53675 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC30.09■■■□□ 2.41
CLTCL1P53675 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC30.09■■■□□ 2.41
CLTCL1P53675 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CLTCL1P53675 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CLTCL1P53675 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CLTCL1P53675 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CLTCL1P53675 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC30.08■■■□□ 2.41
CLTCL1P53675 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CLTCL1P53675 SLC29A4P2-201ENST00000504749 1089 ntBASIC30.08■■■□□ 2.41
CLTCL1P53675 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC30.08■■■□□ 2.41
CLTCL1P53675 HLA-B-256ENST00000639848 1089 ntBASIC30.08■■■□□ 2.41
CLTCL1P53675 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CLTCL1P53675 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CLTCL1P53675 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CLTCL1P53675 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CLTCL1P53675 GCK-205ENST00000437084 1385 ntTSL 5 BASIC30.08■■■□□ 2.41
CLTCL1P53675 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CLTCL1P53675 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC30.08■■■□□ 2.41
CLTCL1P53675 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CLTCL1P53675 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC30.07■■■□□ 2.4
CLTCL1P53675 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC30.07■■■□□ 2.4
CLTCL1P53675 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
CLTCL1P53675 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC30.07■■■□□ 2.4
CLTCL1P53675 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
CLTCL1P53675 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
CLTCL1P53675 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CLTCL1P53675 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
CLTCL1P53675 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
CLTCL1P53675 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CLTCL1P53675 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CLTCL1P53675 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
CLTCL1P53675 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CLTCL1P53675 AC142381.4-202ENST00000563973 229 ntBASIC30.07■■■□□ 2.4
CLTCL1P53675 AC233263.1-201ENST00000578059 224 ntBASIC30.07■■■□□ 2.4
CLTCL1P53675 AL589743.5-201ENST00000616611 1050 ntBASIC30.07■■■□□ 2.4
CLTCL1P53675 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
CLTCL1P53675 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CLTCL1P53675 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CLTCL1P53675 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC30.06■■■□□ 2.4
CLTCL1P53675 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC30.06■■■□□ 2.4
CLTCL1P53675 AL158047.1-201ENST00000445918 881 ntBASIC30.06■■■□□ 2.4
CLTCL1P53675 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
CLTCL1P53675 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CLTCL1P53675 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CLTCL1P53675 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
CLTCL1P53675 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CLTCL1P53675 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CLTCL1P53675 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms