Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2AP49459 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2AP49459 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2AP49459 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2AP49459 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2AP49459 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2AP49459 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2AP49459 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.19□□□□□ -0.3
UBE2AP49459 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBE2AP49459 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2AP49459 TUB-203ENST00000534099 1759 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2AP49459 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
UBE2AP49459 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
UBE2AP49459 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2AP49459 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2AP49459 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2AP49459 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2AP49459 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2AP49459 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2AP49459 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
UBE2AP49459 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
UBE2AP49459 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2AP49459 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UBE2AP49459 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2AP49459 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBE2AP49459 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2AP49459 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UBE2AP49459 IGHV3-19-201ENST00000521488 291 ntBASIC13.18□□□□□ -0.3
UBE2AP49459 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2AP49459 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2AP49459 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UBE2AP49459 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2AP49459 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2AP49459 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2AP49459 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2AP49459 AC099791.1-201ENST00000416440 715 ntBASIC13.17□□□□□ -0.3
UBE2AP49459 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2AP49459 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2AP49459 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2AP49459 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.17□□□□□ -0.3
UBE2AP49459 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
UBE2AP49459 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
UBE2AP49459 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
UBE2AP49459 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC13.17□□□□□ -0.3
UBE2AP49459 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2AP49459 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2AP49459 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2AP49459 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UBE2AP49459 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2AP49459 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2AP49459 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.16□□□□□ -0.3
UBE2AP49459 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2AP49459 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.16□□□□□ -0.3
UBE2AP49459 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2AP49459 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2AP49459 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2AP49459 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.16□□□□□ -0.3
UBE2AP49459 AC106739.1-201ENST00000617035 715 ntBASIC13.16□□□□□ -0.3
UBE2AP49459 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2AP49459 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms