Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 MCM21YDR318W 1107 nt1.88□□□□□ -2.11
TY1B-JR2P47100 HOP1YIL072W 1818 nt1.88□□□□□ -2.11
TY1B-JR2P47100 YHR214C-CYHR214C-C 1437 nt1.88□□□□□ -2.11
TY1B-JR2P47100 UTP20YBL004W 7482 nt1.88□□□□□ -2.11
TY1B-JR2P47100 ARP10YDR106W 855 nt1.87□□□□□ -2.11
TY1B-JR2P47100 tF(GAA)BtF(GAA)B 73 nt1.87□□□□□ -2.11
TY1B-JR2P47100 tF(GAA)FtF(GAA)F 73 nt1.87□□□□□ -2.11
TY1B-JR2P47100 tF(GAA)GtF(GAA)G 73 nt1.87□□□□□ -2.11
TY1B-JR2P47100 tF(GAA)H1tF(GAA)H1 73 nt1.87□□□□□ -2.11
TY1B-JR2P47100 tF(GAA)H2tF(GAA)H2 73 nt1.87□□□□□ -2.11
TY1B-JR2P47100 tF(GAA)MtF(GAA)M 73 nt1.87□□□□□ -2.11
TY1B-JR2P47100 tF(GAA)P1tF(GAA)P1 73 nt1.87□□□□□ -2.11
TY1B-JR2P47100 tF(GAA)P2tF(GAA)P2 73 nt1.87□□□□□ -2.11
TY1B-JR2P47100 EST3YIL009C-A 546 nt1.87□□□□□ -2.11
TY1B-JR2P47100 RMP1YLR145W 606 nt1.87□□□□□ -2.11
TY1B-JR2P47100 EAF7YNL136W 1278 nt1.87□□□□□ -2.11
TY1B-JR2P47100 ESF2YNR054C 951 nt1.87□□□□□ -2.11
TY1B-JR2P47100 YDR034C-DYDR034C-D 5313 nt1.87□□□□□ -2.11
TY1B-JR2P47100 YLR410W-BYLR410W-B 5313 nt1.87□□□□□ -2.11
TY1B-JR2P47100 YCK2YNL154C 1641 nt1.87□□□□□ -2.11
TY1B-JR2P47100 YHI9YHR029C 885 nt1.87□□□□□ -2.11
TY1B-JR2P47100 YOL166CYOL166C 339 nt1.87□□□□□ -2.11
TY1B-JR2P47100 RLI1YDR091C 1827 nt1.87□□□□□ -2.11
TY1B-JR2P47100 UTP13YLR222C 2454 nt1.86□□□□□ -2.11
TY1B-JR2P47100 AAR2YBL074C 1068 nt1.86□□□□□ -2.11
TY1B-JR2P47100 MRE11YMR224C 2079 nt1.86□□□□□ -2.11
TY1B-JR2P47100 CTM1YHR109W 1758 nt1.86□□□□□ -2.11
TY1B-JR2P47100 YJR061WYJR061W 2808 nt1.85□□□□□ -2.11
TY1B-JR2P47100 RRF1YHR038W 693 nt1.85□□□□□ -2.11
TY1B-JR2P47100 VPH2YKL119C 648 nt1.85□□□□□ -2.11
TY1B-JR2P47100 YRR1YOR162C 2433 nt1.85□□□□□ -2.11
TY1B-JR2P47100 PLP1YDR183W 693 nt1.85□□□□□ -2.11
TY1B-JR2P47100 UBC6YER100W 753 nt1.85□□□□□ -2.11
TY1B-JR2P47100 YIL156W-AYIL156W-A 402 nt1.85□□□□□ -2.11
TY1B-JR2P47100 GRX1YCL035C 333 nt1.85□□□□□ -2.11
TY1B-JR2P47100 DSE4YNR067C 3354 nt1.84□□□□□ -2.11
TY1B-JR2P47100 SIP4YJL089W 2490 nt1.84□□□□□ -2.12
TY1B-JR2P47100 MRPL9YGR220C 810 nt1.84□□□□□ -2.12
TY1B-JR2P47100 IRC21YMR073C 606 nt1.84□□□□□ -2.12
TY1B-JR2P47100 MRPL27YBR282W 441 nt1.84□□□□□ -2.12
TY1B-JR2P47100 PKH3YDR466W 2697 nt1.84□□□□□ -2.12
TY1B-JR2P47100 SPS2YDR522C 1509 nt1.83□□□□□ -2.12
TY1B-JR2P47100 CNM67YNL225C 1746 nt1.83□□□□□ -2.12
TY1B-JR2P47100 RDS2YPL133C 1341 nt1.83□□□□□ -2.12
TY1B-JR2P47100 YCK3YER123W 1575 nt1.83□□□□□ -2.12
TY1B-JR2P47100 YLR345WYLR345W 1530 nt1.83□□□□□ -2.12
TY1B-JR2P47100 RPS29AYLR388W 171 nt1.82□□□□□ -2.12
TY1B-JR2P47100 YLR035C-AYLR035C-A 3468 nt1.82□□□□□ -2.12
TY1B-JR2P47100 AEP2YMR282C 1743 nt1.82□□□□□ -2.12
TY1B-JR2P47100 DBP5YOR046C 1449 nt1.82□□□□□ -2.12
TY1B-JR2P47100 YCR050CYCR050C 309 nt1.82□□□□□ -2.12
TY1B-JR2P47100 YCR087C-AYCR087C-A 462 nt1.82□□□□□ -2.12
TY1B-JR2P47100 FRQ1YDR373W 573 nt1.82□□□□□ -2.12
TY1B-JR2P47100 YIR017W-AYIR017W-A 600 nt1.82□□□□□ -2.12
TY1B-JR2P47100 CDC53YDL132W 2448 nt1.81□□□□□ -2.12
TY1B-JR2P47100 YDR179W-AYDR179W-A 1392 nt1.81□□□□□ -2.12
TY1B-JR2P47100 IST1YNL265C 897 nt1.81□□□□□ -2.12
TY1B-JR2P47100 OCT1YKL134C 2319 nt1.81□□□□□ -2.12
TY1B-JR2P47100 VPS15YBR097W 4365 nt1.81□□□□□ -2.12
TY1B-JR2P47100 AFI1YOR129C 2682 nt1.8□□□□□ -2.12
TY1B-JR2P47100 DDI2YFL061W 678 nt1.8□□□□□ -2.12
TY1B-JR2P47100 DCG1YIR030C 735 nt1.8□□□□□ -2.12
TY1B-JR2P47100 SHE2YKL130C 741 nt1.8□□□□□ -2.12
TY1B-JR2P47100 YOR029WYOR029W 336 nt1.8□□□□□ -2.12
TY1B-JR2P47100 SPH1YLR313C 1593 nt1.8□□□□□ -2.12
TY1B-JR2P47100 INP51YIL002C 2841 nt1.8□□□□□ -2.12
TY1B-JR2P47100 FYV8YGR196C 2454 nt1.8□□□□□ -2.12
TY1B-JR2P47100 NDC80YIL144W 2076 nt1.8□□□□□ -2.12
TY1B-JR2P47100 KCS1YDR017C 3153 nt1.8□□□□□ -2.12
TY1B-JR2P47100 CTP1YBR291C 900 nt1.8□□□□□ -2.12
TY1B-JR2P47100 SOK1YDR006C 2706 nt1.79□□□□□ -2.12
TY1B-JR2P47100 UBR1YGR184C 5853 nt1.79□□□□□ -2.12
TY1B-JR2P47100 YJR003CYJR003C 1560 nt1.79□□□□□ -2.12
TY1B-JR2P47100 RNA1YMR235C 1224 nt1.79□□□□□ -2.12
TY1B-JR2P47100 RPL33BYOR234C 324 nt1.79□□□□□ -2.12
TY1B-JR2P47100 MIC60YKR016W 1623 nt1.79□□□□□ -2.12
TY1B-JR2P47100 REG1YDR028C 3045 nt1.79□□□□□ -2.12
TY1B-JR2P47100 MSN5YDR335W 3675 nt1.78□□□□□ -2.12
TY1B-JR2P47100 SEC15YGL233W 2733 nt1.78□□□□□ -2.12
TY1B-JR2P47100 YGR237CYGR237C 2358 nt1.78□□□□□ -2.12
TY1B-JR2P47100 RPN9YDR427W 1182 nt1.77□□□□□ -2.13
TY1B-JR2P47100 STP1YDR463W 1560 nt1.77□□□□□ -2.13
TY1B-JR2P47100 TCM62YBR044C 1719 nt1.77□□□□□ -2.13
TY1B-JR2P47100 PHO5YBR093C 1404 nt1.77□□□□□ -2.13
TY1B-JR2P47100 RGP1YDR137W 1992 nt1.77□□□□□ -2.13
TY1B-JR2P47100 YFL002W-AYFL002W-A 5313 nt1.77□□□□□ -2.13
TY1B-JR2P47100 YGR161W-BYGR161W-B 5313 nt1.77□□□□□ -2.13
TY1B-JR2P47100 YCL019WYCL019W 5313 nt1.77□□□□□ -2.13
TY1B-JR2P47100 CIK1YMR198W 1785 nt1.76□□□□□ -2.13
TY1B-JR2P47100 TOM1YDR457W 9807 nt1.76□□□□□ -2.13
TY1B-JR2P47100 ZRG17YNR039C 1818 nt1.76□□□□□ -2.13
TY1B-JR2P47100 YER023C-AYER023C-A 213 nt1.76□□□□□ -2.13
TY1B-JR2P47100 BUR6YER159C 429 nt1.76□□□□□ -2.13
TY1B-JR2P47100 COS6YGR295C 1146 nt1.76□□□□□ -2.13
TY1B-JR2P47100 ARG2YJL071W 1725 nt1.76□□□□□ -2.13
TY1B-JR2P47100 ATP25YMR098C 1839 nt1.76□□□□□ -2.13
TY1B-JR2P47100 IOC4YMR044W 1428 nt1.75□□□□□ -2.13
TY1B-JR2P47100 QCR9YGR183C 201 nt1.75□□□□□ -2.13
TY1B-JR2P47100 LIP2YLR239C 987 nt1.75□□□□□ -2.13
TY1B-JR2P47100 SPO22YIL073C 2928 nt1.75□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms